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CAZyme Information: MGYG000000048_00037

You are here: Home > Sequence: MGYG000000048_00037

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_P ventriculi
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P ventriculi
CAZyme ID MGYG000000048_00037
CAZy Family GH24
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
535 MGYG000000048_1|CGC1 56932.94 5.4362
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000048 2457227 Isolate United Kingdom Europe
Gene Location Start: 40384;  End: 41991  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000048_00037.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH24 392 522 6.5e-26 0.9708029197080292

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00737 lyz_endolysin_autolysin 2.01e-27 394 527 2 136
endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
COG3772 RrrD 4.34e-21 388 531 6 152
Phage-related lysozyme (muramidase), GH24 family [Cell wall/membrane/envelope biogenesis].
cd16901 lyz_P1 4.61e-16 388 522 2 135
P1 lysozyme Lyz-like proteins. Enterobacteria phage P1 lysozyme Lyz is secreted to the Escherichia coli periplasm where it is membrane bound and inactive. Activation involves the release from the membrane, an intramolecular thiol-disulfide isomerization and extensive structural rearrangement of the N-terminal region. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.
pfam08239 SH3_3 1.04e-11 275 324 3 54
Bacterial SH3 domain.
pfam08239 SH3_3 7.58e-11 119 171 1 54
Bacterial SH3 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPJ85428.1 1.00e-309 1 535 1 534
CEI73566.1 3.91e-36 121 324 107 304
QIF78904.1 4.31e-34 120 331 105 307
QQY75619.1 4.31e-34 120 331 105 307
QQY65926.1 4.31e-34 120 331 105 307

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2KQ8_A 8.08e-12 275 324 12 61
ChainA, Cell wall hydrolase [[Bacillus thuringiensis] serovar konkukian]
2KRS_A 9.76e-10 275 325 11 61
SolutionNMR structure of SH3 domain from CPF_0587 (fragment 415-479) from Clostridium perfringens. Northeast Structural Genomics Consortium (NESG) Target CpR74A. [Clostridium perfringens]
6ET6_A 1.65e-09 388 527 51 194
ChainA, Lysozyme [Acinetobacter baumannii]
2KT8_A 6.01e-08 262 323 3 61
SolutionNMR structure of the CPE1231(468-535) protein from Clostridium perfringens, Northeast Structural Genomics Consortium Target CpR82B [Clostridium perfringens]
2KYB_A 7.46e-08 262 323 2 60
Solutionstructure of CpR82G from Clostridium perfringens. North East Structural Genomics Consortium Target CpR82g [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32041 3.41e-26 121 342 39 258
Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1
Q37896 2.04e-09 397 530 19 146
Endolysin OS=Bacillus phage B103 OX=10778 GN=15 PE=3 SV=1
P11187 6.69e-08 413 526 31 142
Endolysin OS=Bacillus phage phi29 OX=10756 GN=15 PE=1 SV=1
P07540 8.99e-08 413 526 31 142
Endolysin OS=Bacillus phage PZA OX=10757 GN=15 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000271 0.999022 0.000182 0.000186 0.000171 0.000149

TMHMM  Annotations      download full data without filtering help

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