CAZyme Information: MGYG000000048_01278

Basic Information

• Species: Clostridium_P ventriculi
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_P; Clostridium_P ventriculi
• CAZyme ID: MGYG000000048_01278
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
441	MGYG000000048_4|CGC1	49203.82	5.0181

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000048	2457227	Isolate	United Kingdom	Europe

• Gene Location: Start: 92467; End: 93792 Strand: -

Full Sequence      

MAKGALKVQCFSEDTYIPVNKAKIIITPTGIDGVAIGNNIELYTNSWGATEVIDLETPPI
KNSQTPGLIPYSFADITVERDGYIPVLVKGAQIYPDRVAFQKINFTNDDKLTRQQIIIDI
PANVQVGNYPAKIPEAEEKPLPKPQGTVVLPQPVVPEYIRVHAGVPDDNSAPNYTIPYKE
YIKNVASCEIYSTWPETTIRANVYAIISFTLNRVYTEWYRGKGKNFDITSSTAYDHAFSY
GRNIYENIGAIVDEIFSTYIKRDGAKQPLLTQYCDGVNVQCPNWMTQWGSKYLGDQGKTP
YEILTYFYGDNINLTTAPKVNGIPKSYPGTSLTIGSTGEAVKTIQSQLNDIAKAFPLIPK
VAVDGIYNQATANSVKVFQENFNLSNTGIVDYATWYRISDIYVGVTKIAELRCYDENSKK
IFVPPTISAYEDDIPKVPYYI

Enzyme Prediction     

No EC number prediction in MGYG000000048_01278.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	2.42e-09	337	398	1	57	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	3.56e-07	285	398	1	102	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409	PGRP	1.47e-04	317	396	106	181	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QPJ86276.1	0.0	1	441	1	441
QPJ86275.1	5.80e-240	1	439	1	438
QQA12469.1	6.66e-218	1	439	1	438
SQI05872.1	1.90e-217	1	439	1	438
QUD73036.1	1.90e-217	1	439	1	438

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000045	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000048_01278.