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CAZyme Information: MGYG000000054_00486
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides acidifaciens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens | |||||||||||
| CAZyme ID | MGYG000000054_00486 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 47200; End: 48609 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 192 | 450 | 1.8e-43 | 0.7569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 3.60e-14 | 223 | 383 | 246 | 400 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 2.95e-11 | 198 | 418 | 91 | 278 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02793 | PLN02793 | 3.24e-06 | 224 | 417 | 186 | 368 | Probable polygalacturonase |
| PLN03010 | PLN03010 | 5.96e-05 | 225 | 382 | 167 | 311 | polygalacturonase |
| PLN02218 | PLN02218 | 7.00e-05 | 223 | 463 | 200 | 426 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIU95271.1 | 0.0 | 21 | 469 | 19 | 467 |
| QRQ56356.1 | 1.38e-308 | 1 | 469 | 1 | 468 |
| ALJ44674.1 | 1.38e-308 | 1 | 469 | 1 | 468 |
| SCV09008.1 | 1.38e-308 | 1 | 469 | 1 | 468 |
| QNL37066.1 | 1.60e-307 | 1 | 469 | 1 | 468 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A1DBR6 | 4.10e-06 | 214 | 451 | 250 | 461 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.006260 | 0.683852 | 0.308050 | 0.000816 | 0.000488 | 0.000507 |