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CAZyme Information: MGYG000000054_01453

You are here: Home > Sequence: MGYG000000054_01453

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_01453
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
332 MGYG000000054_12|CGC2 38257.97 7.6994
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 91697;  End: 92695  Strand: -

Full Sequence      Download help

MTSWEGMECY  NNSPLIYALE  CKNVAITGTG  LLSPKMDCWK  KWFARPKAHM  DALRKLYTMA60
SKDVPVEKRQ  MAVGENHLRP  HLIHFNRCEN  VLLDSFKIRE  SPFWTIHMYM  CNGGIVRNLD120
VKAHGHNNDG  IDLEMTRNFL  VEDCTFDQGD  DAVVIKAGRN  RDAWRLNTPT  ENIVIRNCNI180
LEGHTLLGIG  SEISGGIRNV  YMHDCKAPQS  VRRLFFVKTN  HRRGAFIENI  HMENIRTGHV240
QRVLEIDTDV  LYQWRELVPT  YEERITRIDG  IYLKNVICDS  ADAIYELKGD  AKLPVKNVVI300
QDVHVDKVND  FVKKVHNVKN  VKEDNVTYGL  LH332

Enzyme Prediction      help

EC 3.2.1.67 3.2.1.-

CAZyme Signature Domains help

Created with Snap1633496683991161321491661821992152322492652822983155324GH28
Family Start End Evalue family coverage
GH28 5 324 6.3e-61 0.8153846153846154

CDD Domains      download full data without filtering help

Created with Snap1633496683991161321491661821992152322492652822983153249Pgu180306Glyco_hydro_2879205PLN0300383325PLN0301080305PLN02218
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.29e-51 3 249 156 407
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.87e-11 80 306 85 304
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 2.69e-09 79 205 137 257
Probable polygalacturonase At3g15720
PLN03010 PLN03010 2.43e-08 83 325 160 396
polygalacturonase
PLN02218 PLN02218 6.83e-06 80 305 192 408
polygalacturonase ADPG

CAZyme Hits      help

Created with Snap1633496683991161321491661821992152322492652822983151331QGT69619.1|GH281329ALJ58890.1|GH281329QUT89993.1|GH281328QUT27372.1|GH281328QDH57575.1|GH28
Hit ID E-Value Query Start Query End Hit Start Hit End
QGT69619.1 1.41e-250 1 331 122 452
ALJ58890.1 8.79e-220 1 329 134 462
QUT89993.1 9.70e-220 1 329 127 455
QUT27372.1 3.17e-202 1 328 128 455
QDH57575.1 9.67e-202 1 328 120 447

PDB Hits      download full data without filtering help

Created with Snap16334966839911613214916618219921523224926528229831523295OLP_A13063JUR_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 7.36e-191 2 329 122 449
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 5.15e-61 1 306 102 411
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Created with Snap16334966839911613214916618219921523224926528229831583244sp|P27644|PGLR_RHIRD79205sp|Q9LW07|PGLR3_ARATH79303sp|Q9FY19|PGLR2_JUNAS79305sp|A2QBB4|RGXA_ASPNC79305sp|Q2EQQ2|RGXA_ASPNG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 6.37e-16 83 244 25 190
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q9LW07 8.64e-09 79 205 137 257
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q9FY19 9.13e-07 79 303 183 399
Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1
A2QBB4 6.18e-06 79 305 154 413
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
Q2EQQ2 8.23e-06 79 305 154 413
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000088 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000054_01453.