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CAZyme Information: MGYG000000054_01533

You are here: Home > Sequence: MGYG000000054_01533

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_01533
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
775 MGYG000000054_14|CGC1 86175.55 5.2148
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 10472;  End: 12799  Strand: -

Full Sequence      Download help

MKVGKVIKIK  VAEVNRLLFL  IVILWLPVLL  LSCSDEKDEQ  RIDEEQKEGI  RVDFGNEVGY60
TPEDLKNWPH  ALFVFENKEC  VEVQESSDNA  SLFVSSVGDR  MVALTYESKE  NLSWGTMTSG120
VPLTSYHLSV  KDVNKDIPQV  WMGQMTVVAE  EGNNLSLKPV  TSVMKVDFVH  APEAFESLSF180
VLPGMANRVR  VDSGELESVG  NLSADKEIRV  TKQESGKETV  VFPMSDSGRW  NLACRLALKN240
GETVEKTLLI  PAGIKTGQAL  EISVDFANYE  VDGTCRLIYR  YAVYGMSKWT  SHTMDIALKE300
EAPVKEENRY  YKVSVLQKDG  TWKEVDVHYA  LCSDAPGHHG  SIWNDWNNSK  RLRDTMSFVN360
FTHDFDAPVK  IRVQKKKSFG  SVKIRPSTYG  ITPVNVGDNT  IEFTLPQWEK  RKVSVEFDGD420
RFYNLMILPN  RPDPDRPDPD  NLPAGMKYYG  PGEHNPERIT  LKEGETLYID  EGAVVYGKVA480
VSGSHVTITG  RGILSGAKLA  HTGGTYAHGA  LLIETNANRL  SNRGYFTISG  ITVVDSPNWT540
LSVYNTDHVM  IDNINILCWI  LNGDGIDLCS  VTDATIQDCF  IRTYDDCITL  KVNSLSVTAT600
RDIRIRNNLI  WADYARGIVI  GPESGTNTRA  GISDCTIEDC  VIMEYPTNLL  ETSSSKLNCD660
GAGLSVSQYP  SGGATSGTIE  NITFQNIVID  NISQKGRPMV  IWQKANQDHA  LIKNVTYRNI720
QILDEANRCQ  ASGIYTNGNT  ISGLVFDKVT  YNGTPIHQSG  KWTVDKPENV  DIIHQ775

Enzyme Prediction      help

No EC number prediction in MGYG000000054_01533.

CAZyme Signature Domains help

Created with Snap3877116155193232271310348387426465503542581620658697736473754GH28
Family Start End Evalue family coverage
GH28 473 754 1.2e-39 0.7446153846153846

CDD Domains      download full data without filtering help

Created with Snap3877116155193232271310348387426465503542581620658697736474692Pgu1481743Glyco_hydro_28526721PLN03010528721PLN02793562753PLN02218
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.41e-20 474 692 202 398
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 7.62e-13 481 743 48 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 2.14e-12 526 721 168 345
polygalacturonase
PLN02793 PLN02793 8.18e-11 528 721 190 365
Probable polygalacturonase
PLN02218 PLN02218 4.63e-09 562 753 241 410
polygalacturonase ADPG

CAZyme Hits      help

Created with Snap38771161551932322713103483874264655035425816206586977361775QRP58902.1|GH281775QQA09745.1|GH281775QQT79214.1|GH281775ASW16403.1|GH2853766BBL02017.1|GH28
Hit ID E-Value Query Start Query End Hit Start Hit End
QRP58902.1 0.0 1 775 1 775
QQA09745.1 0.0 1 775 1 775
QQT79214.1 0.0 1 775 1 775
ASW16403.1 0.0 1 775 1 775
BBL02017.1 3.75e-176 53 766 31 735

PDB Hits      download full data without filtering help

Created with Snap38771161551932322713103483874264655035425816206586977364427641HG8_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1HG8_A 3.60e-06 442 764 28 314
Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Created with Snap3877116155193232271310348387426465503542581620658697736528766sp|Q8RY29|ADPG2_ARATH483765sp|Q0C7H7|PGXB_ASPTN483749sp|Q873X6|PGXB_EMENI483765sp|Q4WBK6|PGXB_ASPFU483765sp|A1DAX2|PGXB_NEOFI
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RY29 3.05e-08 528 766 205 423
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q0C7H7 9.37e-08 483 765 140 388
Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxB PE=3 SV=1
Q873X6 1.66e-07 483 749 146 380
Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgxB PE=2 SV=1
Q4WBK6 2.26e-07 483 765 141 389
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxB PE=3 SV=2
A1DAX2 2.26e-07 483 765 141 389
Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000756 0.041163 0.957951 0.000032 0.000064 0.000033

TMHMM  Annotations      download full data without filtering help

start end
12 31