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CAZyme Information: MGYG000000054_01533

You are here: Home > Sequence: MGYG000000054_01533

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_01533
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
775 MGYG000000054_14|CGC1 86175.55 5.2148
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 10472;  End: 12799  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000054_01533.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 473 754 1.2e-39 0.7446153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.41e-20 474 692 202 398
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 7.62e-13 481 743 48 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 2.14e-12 526 721 168 345
polygalacturonase
PLN02793 PLN02793 8.18e-11 528 721 190 365
Probable polygalacturonase
PLN02218 PLN02218 4.63e-09 562 753 241 410
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP58902.1 0.0 1 775 1 775
QQA09745.1 0.0 1 775 1 775
QQT79214.1 0.0 1 775 1 775
ASW16403.1 0.0 1 775 1 775
BBL02017.1 3.75e-176 53 766 31 735

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1HG8_A 3.60e-06 442 764 28 314
Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RY29 3.05e-08 528 766 205 423
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
Q0C7H7 9.37e-08 483 765 140 388
Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgxB PE=3 SV=1
Q873X6 1.66e-07 483 749 146 380
Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgxB PE=2 SV=1
Q4WBK6 2.26e-07 483 765 141 389
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxB PE=3 SV=2
A1DAX2 2.26e-07 483 765 141 389
Probable exopolygalacturonase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000756 0.041163 0.957951 0.000032 0.000064 0.000033

TMHMM  Annotations      download full data without filtering help

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12 31