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CAZyme Information: MGYG000000054_01779

You are here: Home > Sequence: MGYG000000054_01779

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides acidifaciens
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
CAZyme ID MGYG000000054_01779
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
400 MGYG000000054_17|CGC2 45670.35 9.2237
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000054 5213730 Isolate United Kingdom Europe
Gene Location Start: 32878;  End: 34080  Strand: +

Full Sequence      Download help

MRRIFAIWAV  CLCWGILNAV  PLGPFNATLL  EQLKNDYQKG  DKEVTRYIEL  QEKVAEKYIK60
MTPLSVTAKK  KLPPSKDPRD  YMTLSPYWWP  DSTKTDGLPY  IRKDGERNPE  VYEYPERENA120
NRFGDAAYCL  GVLYYITGKE  VYAKACANHL  RTWFTDPKLG  MNPNMTYAQT  VPGMKKMRGS180
GFIDSRRFSR  ALGIAKLIEG  SKSWTPSDKK  KLDDWATAFC  YWMENSTQGQ  GESHAANNHG240
LWYEAIHVMV  LAYLDRTDRI  REVAEQSILP  KMGTQIADDG  SLPQELKRTL  SLHYSTFALE300
ALMEANQITS  QIGINLWSTP  ASNGKMASQA  VEYLYPYYLN  PESWKFKQIK  PFDQSRAAIL360
LYEAGTALGN  QKYVDTAKRI  GLKYSTSDVE  TIPYLVLKKK  400

Enzyme Prediction      help

No EC number prediction in MGYG000000054_01779.

CAZyme Signature Domains help

Created with Snap2040608010012014016018020022024026028030032034036038066344PL38
Family Start End Evalue family coverage
PL38 66 344 2.2e-97 0.996415770609319

CDD Domains      download full data without filtering help

Created with Snap2040608010012014016018020022024026028030032034036038065344Alginate_lyase237308algL237353AlgLyase
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 3.19e-96 65 344 1 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
PRK00325 algL 2.30e-05 237 308 194 270
polysaccharide lyase.
cd00244 AlgLyase 0.002 237 353 178 290
Alginate Lyase A1-III; enzymatically depolymerizes alginate, a complex copolymer of beta-D-mannuronate and alpha-L-guluronate, by cleaving the beta-(1,4) glycosidic bond.

CAZyme Hits      help

Created with Snap204060801001201401601802002202402602803003203403603801400QUT26274.1|PL381400QIU93437.1|PL381400QNL39956.1|PL3824382QNT66841.1|PL3826380QEC55803.1|PL38
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT26274.1 5.63e-296 1 400 1 400
QIU93437.1 5.63e-296 1 400 1 400
QNL39956.1 4.08e-289 1 400 1 400
QNT66841.1 5.92e-120 24 382 23 380
QEC55803.1 5.63e-79 26 380 34 387

PDB Hits      download full data without filtering help

Created with Snap20406080100120140160180200220240260280300320340360380553853NFV_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NFV_A 3.76e-65 55 385 37 380
Crystalstructure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000219 0.999212 0.000155 0.000135 0.000136 0.000128

TMHMM  Annotations      download full data without filtering help

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