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CAZyme Information: MGYG000000054_03207
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides acidifaciens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens | |||||||||||
| CAZyme ID | MGYG000000054_03207 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 23801; End: 25231 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 189 | 460 | 1.2e-43 | 0.7630769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.05e-14 | 160 | 373 | 118 | 397 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 9.01e-10 | 216 | 448 | 86 | 318 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02793 | PLN02793 | 3.09e-07 | 263 | 372 | 226 | 328 | Probable polygalacturonase |
| PLN03010 | PLN03010 | 3.26e-07 | 169 | 371 | 113 | 307 | polygalacturonase |
| pfam13229 | Beta_helix | 0.007 | 218 | 371 | 3 | 139 | Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ANU58578.2 | 0.0 | 1 | 476 | 1 | 476 |
| QQR16514.1 | 0.0 | 12 | 476 | 1 | 465 |
| SCM55434.1 | 1.98e-69 | 12 | 475 | 6 | 487 |
| AHF88976.1 | 8.86e-66 | 44 | 372 | 71 | 446 |
| ASV74723.1 | 4.82e-58 | 34 | 473 | 30 | 454 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26215 | 6.33e-09 | 189 | 435 | 87 | 343 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
| A1DBR6 | 1.92e-07 | 216 | 452 | 252 | 437 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
| Q40312 | 7.11e-07 | 175 | 381 | 115 | 348 | Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000001 | 0.000296 | 0.999753 | 0.000000 | 0.000000 | 0.000000 |