CAZyme Information: MGYG000000054_03339

Basic Information

• Species: Bacteroides acidifaciens
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
• CAZyme ID: MGYG000000054_03339
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
846	MGYG000000054_54|CGC1	96387	6.3291

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000054	5213730	Isolate	United Kingdom	Europe

• Gene Location: Start: 21087; End: 23627 Strand: +

Full Sequence      

MKTILRFRILFPILVCLFLVTACSDDSLSDTTDNGTEQPDTTPDALHDKRREKPYPKADN
ELYINPAPLIVPQAMKTGDKLQFALSNQENFPDGATTISTAQQWCMYNPHKTLNTGTWYW
RFRSITSDGTAQAWSETYSFEVKDETPKFVTPAFETFITHAPRKHPRLYCFLDNGLEQAR
SKVTSHPEYENLTSRARTALDTDYSVLPNPYDKASDIKNSVQHLYQAYHLIQDKKYADKL
HEILNILLAVPVSDAQLFASNFGSTDIAINFIEIYDLLYAELTPKEKLAIEELLMRVSRY
YFKMYCGMQENHIFDNHFWQHNMRVLFQACFLLYDKPLYSDEILPMLEYYYELWTARAPA
SGFNRDGIWHNGTGYFNANIKTLFYMPSLFSYITQKDFLQHPWYKNAGKALVYSCPPHSK
SVGFGDGSENGDEPHRLQVAFADFLARENGDSYAGWYAKKCQSTLYQDYELRLYHMVRNQ
SYLTELPSNAPKLIWYKDAGEVAIHSDLSNPEQNLTIGFRSSTFASGSHTVANQNSFNLL
YKGVDVFRSSGYYQNFSDAHNLMSYRHTRAHNTILVNGIGQPYSLKGYGNVTRAMGGNHI
SYCLGDASHAYSGISDDPMWVAAFAAAGITQTPENGFGKTPLTKYLRHILLLHPRTVVIY
DELEASEAVHWDWLLHSPTPFDIKAGITTSENSTKGFKTIVQQFSSSPFEFSQTNQFVVP
PSTPEPDQWHLTARYTPCTQNRILTIIQVVPDSEQTPTITRTDDVFQCDDWSIRAGMNTS
QPAELTVTNRTNNALFSYSPNNPEIEGKVYLRKSPSSSLLYDESNGRYGVTEQTDYTPAS
TRAINR

Enzyme Prediction     

No EC number prediction in MGYG000000054_03339.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	507	663	3.8e-50	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	5.72e-85	45	460	2	447	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	1.55e-08	519	676	31	163	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIU94214.1	0.0	7	846	5	850
QDM11441.1	0.0	1	846	1	848
QUT78344.1	0.0	1	846	1	848
QGT73302.1	0.0	1	846	1	848
QUT32653.1	0.0	1	846	1	848

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	7.35e-101	85	802	88	839	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	3.85e-98	85	802	88	839	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	2.18e-33	78	677	50	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000002	1.000062	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000054_03339.