CAZyme Information: MGYG000000054_03342

Basic Information

• Species: Bacteroides acidifaciens
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides acidifaciens
• CAZyme ID: MGYG000000054_03342
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
845	MGYG000000054_54|CGC1	97868.98	7.1844

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000054	5213730	Isolate	United Kingdom	Europe

• Gene Location: Start: 29435; End: 31972 Strand: -

Full Sequence      

MNQQRSKFLELLKFMGAVLLCKLVFSDALEAREYIPSRIHENERETPYPQVFNQPYLNPV
PLLVPKKMKLSDFLQFTLSKKEDFTGSTTILSKPVPWCMFNPHQTLSSGTWYWRFRSVSK
SGEAMSWSPTYSFTITDDIPKFVTPSFEKVKKTMSEKHPRLYCFLEKGLEEARWKMYSHP
EYNRMISSAREGLAADYSTDTQPYKHASAMVAHCEKLHTAYMLLQRDVYANKMVQLIRWL
LPSQVTDRQLDDDFYAGDLAYLFACTYETCHDRFTVDERIKMEQLMVKILNHYRLRFQGT
MENHIFDNHLWQFTFRRLLQTSLVLYDKYPEARDFFEYGYELWTSRAPATGFNRDGAWIN
GTCYFSANAVTLSYVPSLFSYLAGTDFFQHPWYRGVGKAMTYGWPPHSQSVSFGDGHEQM
NDKPLIVRSAFAEFLARETGDPYAAWYTSIDKRYEMDDEMRLYRMVRPESQKTQTGIPVD
EPKAIWFRDCGEMIANSSMQDYQDNLCLNFHSSPFGSGSHTHSDQNAFNLHFRGVPVYGS
TGYYMNFADAHNLLSYRHTRAHNTLLVDGIGQPFSTKAYGNIVRMLGGEHISYALGDASS
AYCGISEYPMWIRNFANQQLEQSVENGFGETPLTLYRRHIFLLHPDKVLIYDEMEAEKPV
RWDWLLHSPVQFSIGEEAKRLITRNEEKQFTAVAQLFSQQDCKLTQTDRFVAPPDEKKAV
RGEVLNNQWHLTASFTPCKRNRILTLIQVNADGTKAVEIVRDGNHFQCGDWSIEAELDTR
KPACLYISNAVNHATFSYGKPSLLIGGKLYKLVHRESSLLFDKIKGEWQVQEMADRKPQL
TGSNQ

Enzyme Prediction     

No EC number prediction in MGYG000000054_03342.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	498	654	4.2e-47	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	1.59e-74	39	447	3	444	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	4.27e-10	512	686	28	184	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRQ49807.1	0.0	39	842	26	831
QUT44273.1	0.0	62	842	1	783
QUT44689.1	0.0	39	842	18	824
QRQ48971.1	0.0	39	842	18	824
QRQ50362.1	2.00e-270	40	841	20	821

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.76e-114	55	839	63	865	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	1.56e-111	55	839	63	865	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	1.34e-35	78	668	57	661	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.27e-34	78	668	57	661	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.018503	0.978058	0.001995	0.000802	0.000368	0.000249

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000054_03342.