CAZyme Information: MGYG000000057_01353

Basic Information

• Species: Bacteroides sp002491635
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp002491635
• CAZyme ID: MGYG000000057_01353
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1004	MGYG000000057_9|CGC1	111257.12	8.1223

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000057	4370351	Isolate	United Kingdom	Europe

• Gene Location: Start: 31618; End: 34632 Strand: +

Full Sequence      

MMKKLTLLLWVAGLFILGLSSLHARTGGPFLPSAADDRCRQWADSVLSGLNVYEKVGQLI
VATIPARADKVTKKQMRELVRKYKVGGLLFSEGTPEEQAILTNMARKDAKIPVMVTFDGE
WGLSMRLQGAPDYPRNAALGCIEDNGLIEEYGREVARQFRELGVHVNFAPDADVNTNPLN
PVIHVRSFGENPQRVAEKVVAYSRGLESGGILSVCKHFPGHGDTDVDSHKALPVLHYDRA
RLDSVELYPFKEMVRAGLGGVMVGHLQVQALDPDGVTPSSLSRNVVTGLLKDELGFKGLV
FTDALDMKGVSAIPQVTTKALLAGNDMVLVQFNTKNAVQELVDAVESEQLSKDELDAKCR
KVLMYKYMLGLRDRQPQLRVSGMSYRINTEEAQALATKLRRSAVTVLSNYFDVLPLAPVE
GDIAVLSIGEKEADAPFVEAMKKNAGISHFHLPWNADEAFWQEVQGQLAAFRRVVISITG
SAYVSDRDVAFLEGLNLRAPLVYTFFTSYRTLQPLMPALAKSSAVVLAHSAETDLQQYVA
DVLFAKKPANGRMSMSIGKLFPAGTGCIIEPGMKPGKTVPEDYGMKSYVLQSIDAVARKG
LEAGAYPGCRVLVWKDGLPVYDKGFGTHSDKDTTAVRSSDLFDLASLTKTTATLLAIMKL
YDEGKIKLDDKVSAYLPFLRNGNKQNITIRELLFHESGLPPYIRFYLDIIDPNSVHGPYS
QSWVDEWHRTQVSEHSYYCSDFKFRKGVVSDKNTPVYTLHMADGMWLNKSFKNSILQRIA
KCELGGKRYVYSDLGFVLLQQVVEKVTELPMDLYLAREFYAPMGLQRTMFLPLMKFAKAE
IMPTASNDFLRRQDICGYVHDETAACMGGVSGNAGLFSTAEEVAKVYQMLLNGGKFNGKR
FLSEATCRLFTTEKSTISRRGLGFDKPDVSIVKRSPCAPSAPETVYGHSGFTGTCAWVDP
ENKTVYVFLSNRLCPNVWNTKLGDMNIRRDIQELIYKSIISQIP

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	106	330	5.5e-59	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	1.66e-75	50	434	1	368	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	1.47e-69	54	363	4	314	Glycosyl hydrolase family 3 N terminal domain.
PRK03642	PRK03642	5.93e-56	577	972	27	395	putative periplasmic esterase; Provisional
pfam00144	Beta-lactamase	2.23e-47	593	973	1	309	Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
COG1680	AmpC	6.06e-41	553	1001	1	384	CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT65081.1	0.0	1	1004	1	1004
QBJ17997.1	0.0	1	1004	1	1004
QMI79444.1	0.0	1	1004	1	1004
QUU00609.1	0.0	1	1004	1	1004
QUT33686.1	0.0	1	1004	1	1004

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6K5J_A	1.41e-57	50	520	11	514	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A	1.37e-54	43	495	35	527	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	4.05e-54	43	495	9	501	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	6.83e-54	43	495	39	531	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3SQL_A	1.96e-48	85	355	58	335	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	7.50e-54	43	495	35	527	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	3.09e-47	75	416	54	425	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
B5F0K5	9.93e-39	580	983	30	406	Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella agona (strain SL483) OX=454166 GN=yfeW PE=3 SV=1
P77619	1.03e-38	580	972	30	395	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
B4TR50	1.34e-38	580	983	30	406	Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000255	0.999113	0.000198	0.000142	0.000140	0.000139

TMHMM  Annotations     

start	end
7	24