CAZyme Information: MGYG000000057_01354

Basic Information

• Species: Bacteroides sp002491635
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp002491635
• CAZyme ID: MGYG000000057_01354
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1011	MGYG000000057_9|CGC1	112792.54	9.5572

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000057	4370351	Isolate	United Kingdom	Europe

• Gene Location: Start: 34654; End: 37689 Strand: +

Full Sequence      

MKRIYLLAYIVILCCFCPLLKAQLGPMPFTPVPLNDPSLVRLLNSDVRCRQWVDSVLQCL
TLKERIGQLFIYTIAPQQDKANKELLRKVVEDYKVGGLLFSGGLMQNQVMLTNEAQRMAE
VPLMITFDGEWGLAMRLRGTPNFPRNMVLGCIQNDTLIYEYGREVARQCRELGVQVNFAP
VADVNINPKNPVINTRSFGESPFNVANKVVAYSKGLEDGGILSVSKHFPGHGDTDVDSHK
ALPVLPFTRARLDSIELYPFRKAIRAGLGGMMVGHLEVPAIEPQKGLPSSLSRKVVSGLL
VNDLGFQGLVFTDALAMKGVSGNESVCLQALKAGNDLLLVPRRIKEEVEAVLAAVKKGEL
TEKEIEAKCRKVLKYKYALGLEKKPHVRLSGLETRINTPKTRDLMRRLNLAAITVLDNRG
EVLPLDPSIGEVAVLNVGEVQEIRPFLKELSRYTRPVEFHLGKNLPEADGNRLRNALAKY
KRILVCVTEHRLTPYQNFFAKFAPDVPVVYLFFIPGKQVLQIKQGGTAAEAVVLAHSSNE
EVQRQVARIVYGGACSEGRLSASIGSRFAAGAGVTLTLQSVPRFVPEEHGMNSRLLAEID
KIAEEGIREGAYPGCQVVVLKDGREMYNKAFGTHVWNKAGSKAPPVKKTDVYDIASLTKT
TATLLAVMKLYDGGRLSLTDRVSDYLPFLQDTDKKNITVRELLMHESGLPSTLLFYQEAI
DEESYTGTLFKVRPDAQHSARIGRQTWANPKFRFCQGLTSKVQTPEYTMQVSDSLWLNRS
FKQKYLQKIVDAPLRDKRYRYSCVGFILLQQLVEARTGMSMDEYLAKEFYTPMGLERTGY
LPLRFLKKEDIVPSSTDLFLRKTTLQGFVHDESAAFQGGVSGNAGLFSTAGEVAKVYQML
LNGGELDGKRYLSKETCRVFTTTVSRISRRGLGFDKPDRRNPQKSPCAESAPASVYGHTG
FTGTCAWTDPENGLVYVFLSNRTYPDVWNNKLMRLDIRTRIQEAVYKSLVK

Enzyme Prediction     

EC	3.2.1.-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	116	340	1e-55	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	2.39e-82	61	373	1	314	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	2.06e-79	60	435	1	360	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK03642	PRK03642	1.46e-53	586	1009	30	431	putative periplasmic esterase; Provisional
pfam00144	Beta-lactamase	1.52e-44	599	987	1	313	Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
COG1680	AmpC	8.08e-44	559	986	8	367	CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMI79443.1	0.0	1	1010	1	1010
QBJ17996.1	0.0	1	1011	1	1011
QUU00608.1	0.0	1	1011	1	1011
QUT62072.1	0.0	1	1010	1	1010
QQA30538.1	0.0	1	1010	1	1010

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6K5J_A	5.93e-66	58	564	9	531	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A	5.26e-58	54	430	36	452	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	1.53e-57	54	430	10	426	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	2.68e-57	54	430	40	456	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3SQL_A	5.84e-54	67	365	31	335	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	2.88e-57	54	430	36	452	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	1.89e-46	86	425	55	425	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
P77619	3.13e-39	586	987	30	400	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
Q8XBJ0	2.57e-38	586	987	30	400	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=yfeW PE=3 SV=1
O05213	3.55e-36	592	987	45	409	N-acetylmuramyl-L-alanine amidase OS=Bacillus subtilis (strain 168) OX=224308 GN=amiE PE=1 SV=3

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000224	0.999161	0.000192	0.000141	0.000131	0.000124

TMHMM  Annotations     

start	end
5	27