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CAZyme Information: MGYG000000064_01875

You are here: Home > Sequence: MGYG000000064_01875

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium baratii
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium baratii
CAZyme ID MGYG000000064_01875
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
949 MGYG000000064_2|CGC3 112281.93 7.6111
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000064 3139911 Isolate United Kingdom Europe
Gene Location Start: 105685;  End: 108534  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000064_01875.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 592 724 1.7e-24 0.9782608695652174

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 3.10e-18 620 821 39 235
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16889 Hepar_II_III_N 5.40e-15 373 549 132 317
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFY71989.1 1.63e-125 286 851 47 616
QSF40167.1 1.04e-121 284 851 44 615
QSF28956.1 1.04e-121 284 851 44 615
AJI24841.1 1.04e-121 284 851 44 615
QCY24070.1 1.04e-121 284 851 44 615

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JMD_A 3.38e-14 388 849 183 651
HeparinaseIII-BT4657 gene product, Methylated Lysines [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000064_01875.