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CAZyme Information: MGYG000000066_04548

You are here: Home > Sequence: MGYG000000066_04548

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066755 sp900066755
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp900066755
CAZyme ID MGYG000000066_04548
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
727 MGYG000000066_63|CGC1 80189.29 4.5308
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000066 5871603 Isolate United Kingdom Europe
Gene Location Start: 5195;  End: 7378  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000066_04548.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 248 524 1.1e-34 0.7415384615384616

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.66e-06 280 411 241 359
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.72e-06 279 493 87 311
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02155 PLN02155 3.02e-05 279 465 147 360
polygalacturonase
PLN02218 PLN02218 5.90e-04 279 450 194 378
polygalacturonase ADPG
PLN02793 PLN02793 0.004 279 467 179 382
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMV67078.1 4.50e-228 75 727 31 664
QNK57056.1 9.30e-167 86 545 38 493
AZS17008.1 1.16e-163 52 545 24 509
QNK57052.1 5.66e-157 88 726 35 647
QJD84920.1 7.54e-156 81 545 28 488

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999853 0.000151 0.000001 0.000000 0.000000 0.000001

TMHMM  Annotations      download full data without filtering help

start end
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