CAZyme Information: MGYG000000066_04548

Basic Information

• Species: GCA-900066755 sp900066755
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp900066755
• CAZyme ID: MGYG000000066_04548
• CAZy Family: GH28
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
727	MGYG000000066_63|CGC1	80189.29	4.5308

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000066	5871603	Isolate	United Kingdom	Europe

• Gene Location: Start: 5195; End: 7378 Strand: -

Full Sequence      

MKNVNKKEFCLRNSPPAAGRVSGIFFPAAVRSPGELFYSIGVFSYGIKKTALAAVVCAMV
SFMTAGAAWGEEAYTVNEPMERAYEPLVNVYEKPDAMPEKYSSSDFQVQAGGLDIPVYVS
GNNAWGNPVSYGTFESTGPVEIQISAQVPFTDYALLPESLGLSGQRAGNKVTFTAQPGTD
ITFLPDRNYNGRVLHLFVREPLTDIPDIQSDQVIHYGPGYYDLSGRPPLMLRTGQTLYLE
GGAVLRGRVLVQDADHVTICGPGILLNDYVSQDSYDGVAVALKNANDVTVRDITVIRDMN
SWISFMWKCSNVTVKNYKAINARYASSDGFNVANCQGVLFDGSFIHSCDDSVAIKGTGNN
GYNPAEDPSQALPTSNITYQNSQLWSDANNAIGIGAETQAGYFDQIRFQNIDILRNYDDL
NYPDQLTERSAINICALNATQIQNVTFEDIRVEKAKRLINITMEDSFWFGSLAGNWQWPG
SIQNVTYRNITSKSDGSNQIRISGHDSNHLISDIHFENIKIQDTPLTDFDTDIFSVNSFG
KNIRLVSDLHPEGVTADGPITAPSNRYQAAEQLSDTQGGNGWYYRTWQAGVGTLDMAWNP
DGSNHWRGPKQWDAIWVEQGQLLFHPDETQILLDWKAPRSGVISISGTVRKYASEGGDGV
NVSIWKNDRMIWPVNGAWRTIDFDDTAGVAAEVSTSVVPDDVISFRVDKRGNTAYDSTAW
TPTIIYE

Enzyme Prediction     

No EC number prediction in MGYG000000066_04548.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	248	524	1.1e-34	0.7415384615384616

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG5434	Pgu1	1.66e-06	280	411	241	359	Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295	Glyco_hydro_28	4.72e-06	279	493	87	311	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02155	PLN02155	3.02e-05	279	465	147	360	polygalacturonase
PLN02218	PLN02218	5.90e-04	279	450	194	378	polygalacturonase ADPG
PLN02793	PLN02793	0.004	279	467	179	382	Probable polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QMV67078.1	4.50e-228	75	727	31	664
QNK57056.1	9.30e-167	86	545	38	493
AZS17008.1	1.16e-163	52	545	24	509
QNK57052.1	5.66e-157	88	726	35	647
QJD84920.1	7.54e-156	81	545	28	488

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999853	0.000151	0.000001	0.000000	0.000000	0.000001

TMHMM  Annotations     

start	end
51	70