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CAZyme Information: MGYG000000066_04571

You are here: Home > Sequence: MGYG000000066_04571

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066755 sp900066755
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp900066755
CAZyme ID MGYG000000066_04571
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
727 MGYG000000066_64|CGC1 80189.29 4.5308
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000066 5871603 Isolate United Kingdom Europe
Gene Location Start: 5079;  End: 7262  Strand: -

Full Sequence      Download help

MKNVNKKEFC  LRNSPPAAGR  VSGIFFPAAV  RSPGELFYSI  GVFSYGIKKT  ALAAVVCAMV60
SFMTAGAAWG  EEAYTVNEPM  ERAYEPLVNV  YEKPDAMPEK  YSSSDFQVQA  GGLDIPVYVS120
GNNAWGNPVS  YGTFESTGPV  EIQISAQVPF  TDYALLPESL  GLSGQRAGNK  VTFTAQPGTD180
ITFLPDRNYN  GRVLHLFVRE  PLTDIPDIQS  DQVIHYGPGY  YDLSGRPPLM  LRTGQTLYLE240
GGAVLRGRVL  VQDADHVTIC  GPGILLNDYV  SQDSYDGVAV  ALKNANDVTV  RDITVIRDMN300
SWISFMWKCS  NVTVKNYKAI  NARYASSDGF  NVANCQGVLF  DGSFIHSCDD  SVAIKGTGNN360
GYNPAEDPSQ  ALPTSNITYQ  NSQLWSDANN  AIGIGAETQA  GYFDQIRFQN  IDILRNYDDL420
NYPDQLTERS  AINICALNAT  QIQNVTFEDI  RVEKAKRLIN  ITMEDSFWFG  SLAGNWQWPG480
SIQNVTYRNI  TSKSDGSNQI  RISGHDSNHL  ISDIHFENIK  IQDTPLTDFD  TDIFSVNSFG540
KNIRLVSDLH  PEGVTADGPI  TAPSNRYQAA  EQLSDTQGGN  GWYYRTWQAG  VGTLDMAWNP600
DGSNHWRGPK  QWDAIWVEQG  QLLFHPDETQ  ILLDWKAPRS  GVISISGTVR  KYASEGGDGV660
NVSIWKNDRM  IWPVNGAWRT  IDFDDTAGVA  AEVSTSVVPD  DVISFRVDKR  GNTAYDSTAW720
TPTIIYE727

Enzyme Prediction      help

No EC number prediction in MGYG000000066_04571.

CAZyme Signature Domains help

Created with Snap3672109145181218254290327363399436472508545581617654690248524GH28
Family Start End Evalue family coverage
GH28 248 524 1.1e-34 0.7415384615384616

CDD Domains      download full data without filtering help

Created with Snap3672109145181218254290327363399436472508545581617654690280411Pgu1279493Glyco_hydro_28279465PLN02155279450PLN02218279467PLN02793
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.66e-06 280 411 241 359
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 4.72e-06 279 493 87 311
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02155 PLN02155 3.02e-05 279 465 147 360
polygalacturonase
PLN02218 PLN02218 5.90e-04 279 450 194 378
polygalacturonase ADPG
PLN02793 PLN02793 0.004 279 467 179 382
Probable polygalacturonase

CAZyme Hits      help

Created with Snap367210914518121825429032736339943647250854558161765469075727QMV67078.1|GH2886545QNK57056.1|GH2852545AZS17008.1|GH2888726QNK57052.1|GH2881545QJD84920.1|GH28
Hit ID E-Value Query Start Query End Hit Start Hit End
QMV67078.1 4.50e-228 75 727 31 664
QNK57056.1 9.30e-167 86 545 38 493
AZS17008.1 1.16e-163 52 545 24 509
QNK57052.1 5.66e-157 88 726 35 647
QJD84920.1 7.54e-156 81 545 28 488

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999853 0.000151 0.000001 0.000000 0.000000 0.000001

TMHMM  Annotations      download full data without filtering help

start end
51 70