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CAZyme Information: MGYG000000070_00082

You are here: Home > Sequence: MGYG000000070_00082

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lawsonibacter sp900066825
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter sp900066825
CAZyme ID MGYG000000070_00082
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2015 MGYG000000070_1|CGC1 230229.39 4.7704
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000070 3806775 Isolate United Kingdom Europe
Gene Location Start: 85647;  End: 91694  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000070_00082.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4646 COG4646 8.81e-72 720 1247 1 540
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG4646 COG4646 5.41e-29 1388 1577 439 635
Adenine-specific DNA methylase, N12 class [Replication, recombination and repair].
COG0827 YtxK 1.40e-10 537 707 173 348
Adenine-specific DNA methylase [Replication, recombination and repair].
smart00487 DEXDc 1.13e-09 1191 1294 7 110
DEAD-like helicases superfamily.
cd18011 DEXDc_RapA 2.69e-09 1193 1441 1 173
DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASV45029.1 0.0 424 1933 1548 3139
QIW86704.1 0.0 424 1933 1616 3207
QIW86628.1 0.0 424 1933 1616 3207
AXF51455.1 0.0 362 1995 1723 3437
AEY69616.1 0.0 433 1995 1695 3344

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q71TF8 8.35e-31 461 1764 68 1567
Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000070_00082.