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CAZyme Information: MGYG000000072_00762

You are here: Home > Sequence: MGYG000000072_00762

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1394 sp900066845
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA1394; UBA1394 sp900066845
CAZyme ID MGYG000000072_00762
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
945 104221.79 4.9626
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000072 2648835 Isolate United Kingdom Europe
Gene Location Start: 145896;  End: 148733  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000072_00762.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 228 420 1.2e-30 0.8316831683168316
CBM13 550 695 1.5e-22 0.7021276595744681
CBM13 704 863 1e-16 0.776595744680851

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.06e-23 158 496 20 340
Pectate lyase [Carbohydrate transport and metabolism].
pfam14200 RicinB_lectin_2 5.77e-18 635 733 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 6.68e-18 589 678 5 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.68e-17 548 629 12 89
Ricin-type beta-trefoil lectin domain-like.
cd14256 Dockerin_I 7.96e-16 887 942 1 56
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CDM70399.1 8.96e-197 36 693 35 696
AUO18238.1 2.22e-188 36 693 39 707
CBL17651.1 3.33e-142 30 723 33 722
CBL16867.1 3.18e-127 69 921 77 891
ASR46637.1 6.59e-94 30 517 35 537

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1VBL_A 1.80e-10 265 390 156 301
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
1PCL_A 7.10e-09 182 449 14 316
ChainA, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94449 2.03e-19 168 496 35 335
Pectin lyase OS=Bacillus subtilis OX=1423 GN=pelB PE=1 SV=1
Q2TZY0 1.79e-17 182 389 43 234
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1
B8NBC2 1.79e-17 182 389 43 234
Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1
Q5AVN4 2.17e-14 185 451 51 303
Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1
Q00645 2.87e-14 182 389 43 234
Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000367 0.998945 0.000200 0.000160 0.000152 0.000145

TMHMM  Annotations      download full data without filtering help

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