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CAZyme Information: MGYG000000078_02195

You are here: Home > Sequence: MGYG000000078_02195

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira rogosae_A
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira rogosae_A
CAZyme ID MGYG000000078_02195
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
564 63797.21 4.5372
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000078 3032544 Isolate United Kingdom Europe
Gene Location Start: 14062;  End: 15756  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000078_02195.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 269 551 1.7e-35 0.8445945945945946

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 8.08e-53 282 558 26 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 2.97e-39 282 559 127 419
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
pfam00704 Glyco_hydro_18 2.52e-25 266 548 10 305
Glycosyl hydrolases family 18.
cd06549 GH18_trifunctional 4.12e-25 282 555 24 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
smart00636 Glyco_18 7.71e-23 312 549 63 333
Glyco_18 domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR72932.1 4.45e-202 59 561 2 505
CBL22179.1 5.63e-128 3 560 7 553
BCJ97263.1 9.17e-123 5 563 2 568
ASM68484.1 4.18e-121 20 562 27 568
BCN32821.1 7.84e-121 4 563 2 566

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 2.50e-18 339 549 94 310
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4S3J_A 1.80e-16 322 558 176 421
Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876]
4S3K_A 9.63e-13 332 560 188 425
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
4Q6T_A 4.59e-11 301 560 52 337
Thecrystal structure of a class V chitininase from Pseudomonas fluorescens Pf-5 [Pseudomonas protegens Pf-5]
5WUP_A 1.56e-08 331 553 183 441
Crystalstructure of a insect group III chitinase (CAD1) from Ostrinia furnacalis [Ostrinia furnacalis],5WV9_A Crystal structure of a insect group III chitinase complex with (GlcNAc)6 (CAD1-(GlcNAc)6) from Ostrinia furnacalis [Ostrinia furnacalis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 4.29e-24 256 560 24 341
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
P37531 5.28e-19 332 563 184 424
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
O05495 1.19e-17 339 549 186 402
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
P0DPJ9 7.24e-15 322 558 175 420
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1
Q9K3E4 9.65e-15 322 558 175 420
Cortical fragment-lytic enzyme OS=Bacillus cereus OX=1396 GN=sleL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.960730 0.034231 0.000759 0.000276 0.000137 0.003889

TMHMM  Annotations      download full data without filtering help

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