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CAZyme Information: MGYG000000083_02775

You are here: Home > Sequence: MGYG000000083_02775

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Peribacillus simplex
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-1321; Peribacillus; Peribacillus simplex
CAZyme ID MGYG000000083_02775
CAZy Family GH39
CAZyme Description HTH-type transcriptional activator RhaS
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
772 MGYG000000083_3|CGC5 89529.48 5.6068
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000083 5860218 Isolate United Kingdom Europe
Gene Location Start: 445545;  End: 447863  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000083_02775.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 333 718 7e-22 0.9559164733178654

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 1.33e-50 343 771 1 427
Beta-xylosidase [Carbohydrate transport and metabolism].
225117 COG2207 9.36e-25 165 265 19 119
AraC AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
smart00342 HTH_ARAC 2.77e-22 184 265 3 84
helix_turn_helix, arabinose operon control protein.
pfam12833 HTH_18 9.72e-19 188 265 1 79
Helix-turn-helix domain.
COG4977 GlxA 1.14e-15 165 265 219 319
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYF80459.1 0.0 1 772 1 772
QHS24385.1 4.54e-150 27 769 4 756
QOF64550.1 7.88e-139 10 769 7 777
QOF56795.1 7.88e-139 10 769 7 777
QOF62367.1 2.39e-137 4 769 2 777

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SWI_A 6.82e-07 168 265 7 105
TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6GKK1 7.19e-68 27 769 22 740
Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q5HJR8 1.36e-67 27 769 22 740
Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2
Q99XB1 6.76e-67 27 769 22 740
Uncharacterized HTH-type transcriptional regulator SAV0101 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=SAV0101 PE=4 SV=1
Q7A882 6.76e-67 27 769 22 740
Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1
Q8NYT6 1.28e-66 27 769 22 740
Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000083_02775.