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CAZyme Information: MGYG000000084_00025

You are here: Home > Sequence: MGYG000000084_00025

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger formicilis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger formicilis
CAZyme ID MGYG000000084_00025
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
988 MGYG000000084_1|CGC1 107661.83 4.2365
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000084 3006488 Isolate United Kingdom Europe
Gene Location Start: 27823;  End: 30789  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000084_00025.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 672 886 4.8e-42 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01915 Glyco_hydro_3_C 2.99e-27 90 338 2 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 2.06e-16 695 913 78 307
Glycosyl hydrolase family 3 N terminal domain.
PRK15098 PRK15098 2.38e-13 87 475 393 735
beta-glucosidase BglX.
PRK15098 PRK15098 2.41e-11 706 913 119 343
beta-glucosidase BglX.
pfam14310 Fn3-like 2.71e-10 420 494 2 69
Fibronectin type III-like domain. This domain has a fibronectin type III-like structure. It is often found in association with pfam00933 and pfam01915. Its function is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADL35904.1 0.0 3 980 2 979
QOS39106.1 4.58e-279 9 967 3 986
AIQ45785.1 6.54e-215 58 967 45 958
AIQ51426.1 5.38e-207 58 967 45 958
VEG24749.1 2.43e-201 13 965 9 991

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WUG_A 4.60e-51 87 864 46 747
Expression,characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii],5WVP_A Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii]
2X40_A 1.44e-33 646 913 3 294
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
2X42_A 1.04e-32 646 913 3 294
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
7MS2_A 1.73e-25 670 913 30 276
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
4I3G_A 2.03e-17 669 866 84 276
CrystalStructure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae],4I3G_B Crystal Structure of DesR, a beta-glucosidase from Streptomyces venezuelae in complex with D-glucose. [Streptomyces venezuelae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P15885 4.14e-54 87 937 19 778
Beta-glucosidase OS=Ruminococcus albus OX=1264 PE=3 SV=1
P16084 1.05e-51 87 884 38 786
Beta-glucosidase A OS=Butyrivibrio fibrisolvens OX=831 GN=bglA PE=3 SV=1
Q5BB53 6.43e-28 671 922 32 270
Probable beta-glucosidase I OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bglI PE=2 SV=2
B8NDE2 3.39e-27 671 864 32 225
Probable beta-glucosidase I OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=bglI PE=3 SV=2
Q2U8Y5 3.39e-27 671 864 32 225
Probable beta-glucosidase I OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=bglI PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.269029 0.698584 0.011111 0.018362 0.001959 0.000931

TMHMM  Annotations      download full data without filtering help

start end
13 35
950 972