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CAZyme Information: MGYG000000084_02299

You are here: Home > Sequence: MGYG000000084_02299

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger formicilis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger formicilis
CAZyme ID MGYG000000084_02299
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
813 MGYG000000084_12|CGC1 88102.58 5.9529
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000084 3006488 Isolate United Kingdom Europe
Gene Location Start: 15494;  End: 17935  Strand: +

Full Sequence      Download help

MKNTTAMADY  ELRHIEALRK  DLAGCTVLLK  KDGGFPLEKP  CTLAAYGSGV  RRTIRGGTGS60
GEVNSRYSVT  IEEGLQQAGF  TLTGMEWHTG  YEQAREKAHK  AFLKQLKKDA  KAAKQNFILY120
GMGKVMPEPE  YDLPLNAEGD  AAIYVVSRIS  GEGNDRTPLK  GDIRLTDSEV  RDILALDKKF180
TRFMLVLNVG  GVVDLSPVMS  VRNILLLSQL  GVETGGALAD  ILLGKANPSG  KLTTTWAAFE240
EYPEMPDFED  MNETRYREGI  YVGYRYFDTF  RKKALFPFGY  GLSYTEFRLG  TAGVEANGAQ300
VTVRTTVENI  GAMAGRQVVQ  VYLSKPAGKL  DAPRQELCAF  AKTRTLAPGE  AETVTCSFTL360
PEMAAYDAET  AAYILEAGDH  LVRVGVSSAE  TVPTAVLHLG  KTVTTLQAKN  VLGSTDFTDL420
TAPAAAMERP  EGVPVIEIDP  ASIFCETIDY  ARTEEILPEV  DALTKEDAAL  LLIGDFDPNA480
KGLASMIGTA  GRHVCGAAGE  SCSTVNGIPW  LIMADGPAGL  RLAKEYYEDG  KGKHAVGNAS540
MPDSIMEMLS  GPMKLVMSLM  GGNGKPKAGC  EIKTQYCTAI  PIGTALAQSF  DTDFVQRCGD600
IVGEEMEHFG  VHLWLAPALN  IHRSIRCGRN  FEYYSEDPLV  SGKMAAAMTR  GVQAHKGCGT660
TIKHYAANNK  EYNRTRNNSM  VSERAMREIY  LKGFGICVRE  SQPKAVMTSY  NLLNGTHTAE720
SRGLVMDILR  AEFGYQGIVM  TDWVTPMTGD  ARSAHRDSQA  QYVAAAGGDL  FMPGNKGDYD780
NLLQGIDSGA  VTLEQVKINA  SRVVKMARAL  TKE813

Enzyme Prediction      help

EC 3.2.1.21 3.2.1.58 3.2.1.37 3.2.1.-

CAZyme Signature Domains help

Created with Snap4081121162203243284325365406447487528569609650691731772506773GH3
Family Start End Evalue family coverage
GH3 506 773 2.4e-60 0.9675925925925926

CDD Domains      download full data without filtering help

Created with Snap4081121162203243284325365406447487528569609650691731772578810BglX26264Glyco_hydro_3_C578803Glyco_hydro_316391PRK15098318388Fn3-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 1.23e-41 578 810 81 308
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 3.99e-30 26 264 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 2.18e-27 578 803 86 313
Glycosyl hydrolase family 3 N terminal domain.
PRK15098 PRK15098 4.61e-25 16 391 389 757
beta-glucosidase BglX.
pfam14310 Fn3-like 3.17e-19 318 388 2 71
Fibronectin type III-like domain. This domain has a fibronectin type III-like structure. It is often found in association with pfam00933 and pfam01915. Its function is unknown.

CAZyme Hits      help

Created with Snap40811211622032432843253654064474875285696096506917317727813AFN84577.1|GH37810QFJ55305.1|GH310807QRT50987.1|GH310807VCV22858.1|GH310807CBL11427.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AFN84577.1 2.50e-317 7 813 3 809
QFJ55305.1 6.72e-293 7 810 1 801
QRT50987.1 6.51e-279 10 807 6 799
VCV22858.1 2.19e-277 10 807 6 800
CBL11427.1 2.19e-277 10 807 6 800

PDB Hits      download full data without filtering help

Created with Snap4081121162203243284325365406447487528569609650691731772278135WUG_A133882X42_A133882X40_A5078067MS2_A5787435WAB_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WUG_A 4.13e-95 27 813 49 828
Expression,characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii],5WVP_A Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii]
2X42_A 1.44e-62 13 388 323 702
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
2X40_A 1.44e-62 13 388 323 702
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
7MS2_A 8.21e-37 507 806 36 285
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
5WAB_A 5.95e-36 578 743 69 233
CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]

Swiss-Prot Hits      download full data without filtering help

Created with Snap408112116220324328432536540644748752856960965069173177213743sp|P16084|BGLS_BUTFI27804sp|P15885|BGLS_RUMAL581810sp|Q5BFG8|BGLB_EMENI561804sp|P27034|BGLS_RHIRD507806sp|P14002|BGLB_ACET2
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P16084 3.84e-99 13 743 27 770
Beta-glucosidase A OS=Butyrivibrio fibrisolvens OX=831 GN=bglA PE=3 SV=1
P15885 1.06e-84 27 804 22 759
Beta-glucosidase OS=Ruminococcus albus OX=1264 PE=3 SV=1
Q5BFG8 1.24e-39 581 810 70 289
Beta-glucosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=bglB PE=1 SV=1
P27034 1.92e-37 561 804 42 274
Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1
P14002 4.50e-36 507 806 36 285
Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000084_02299.