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CAZyme Information: MGYG000000084_02303

You are here: Home > Sequence: MGYG000000084_02303

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger formicilis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger formicilis
CAZyme ID MGYG000000084_02303
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
729 MGYG000000084_12|CGC1 81470.75 5.0777
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000084 3006488 Isolate United Kingdom Europe
Gene Location Start: 22549;  End: 24738  Strand: +

Full Sequence      Download help

MSKTILLNQN  WIFSKEGHDE  PVTLPHTWNA  IDGQDGGNDY  YRGTCCYTTV  LPDIVLPENG60
RAVLQFDAVA  MTAEVYLNEQ  KLAEHKGGYS  AFCVDITDAL  RNGSNLLRVN  VDNSDNDTVY120
PQKADFTFYG  GIYRDVTLHV  VPAAHFALAE  NGAVPVRVTP  IVTDLNARRC  EVTVEAAVVG180
AESVSFTLDG  QQTSVAAKDG  TARAVFTLEH  ARLWDGLDDP  YLYTVTARLD  NGETETARFG240
CRKFEIDPQK  GFILNGRSYP  LRGVSRHQDR  KGAGVAVTKE  MMEEDMALIL  EMGANTIRLA300
HYQHAQAFYD  LCDEKGVVIW  AEIPYITMHM  HNGRANTLTQ  MEELIVQNYN  HPCIAVWGLS360
NEITAASAVN  EELLENHRAL  NELAHRLDPT  RPTTMANVFM  LEITSPILEI  PDVNSYNLYF420
GWYLGELDQN  DDFFDAYHAK  YPDRCIGFSE  YGADANPAYQ  SAHPEKGDYT  ETYQCVYHEH480
MAKMIADRPW  LWATHVWNMF  DFAADGRDEG  GKNGENQKGL  VTFDRKIKKD  AFYLYKAYWS540
KQPFVHTCGS  RYVDRTEDVT  EVRVYSNLPE  VSLYKDGHLV  ETKKGDKVFV  FNVPITGKHS600
IEARAGAYSS  VILVNKAAEP  NPAYAMSNRQ  VVNNWFDGEL  DETCWSVKDN  MAAAMADAKV660
GPVLKAITDK  AAAARGDVAA  AVKDNPALVA  MMERAMQRMT  VESMLKQAGA  DAESIRQLNR720
VLQGIKKDV729

Enzyme Prediction      help

EC 3.2.1.31

CAZyme Signature Domains help

Created with Snap36721091451822182552913283644004374735105465836196566922584GH2
Family Start End Evalue family coverage
GH2 2 584 1.8e-103 0.6715425531914894

CDD Domains      download full data without filtering help

Created with Snap367210914518221825529132836440043747351054658361965669258546PRK101507542LacZ59391ebgA252539Glyco_hydro_2_C95392lacZ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 1.79e-73 58 546 80 599
beta-D-glucuronidase; Provisional
COG3250 LacZ 2.11e-61 7 542 30 598
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 1.12e-32 59 391 125 470
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836 Glyco_hydro_2_C 7.07e-29 252 539 8 298
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK09525 lacZ 9.66e-25 95 392 173 484
beta-galactosidase.

CAZyme Hits      help

Created with Snap36721091451822182552913283644004374735105465836196566921728AXB29244.1|GH21728CBL02683.1|GH21728AEN97243.1|GH21727QTE67954.1|GH27727AHF24555.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AXB29244.1 0.0 1 728 1 735
CBL02683.1 0.0 1 728 1 735
AEN97243.1 0.0 1 728 1 734
QTE67954.1 0.0 1 727 1 724
AHF24555.1 0.0 7 727 7 734

PDB Hits      download full data without filtering help

Created with Snap367210914518221825529132836440043747351054658361965669217287KGZ_A16576MVG_A17256MVH_A16516MVF_A16013CMG_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7KGZ_A 0.0 1 728 1 734
ChainA, Beta-glucuronidase [Roseburia hominis],7KGZ_B Chain B, Beta-glucuronidase [Roseburia hominis]
6MVG_A 3.46e-237 1 657 24 697
Crystalstructure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus],6MVG_B Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus],6MVG_C Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus]
6MVH_A 5.20e-232 1 725 24 769
Crystalstructure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis],6MVH_B Crystal structure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis],6MVH_C Crystal structure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis],6MVH_D Crystal structure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis]
6MVF_A 4.97e-176 1 651 24 702
Crystalstructure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_B Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_C Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_D Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_E Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_F Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6]
3CMG_A 6.60e-119 1 601 3 636
Crystalstructure of putative beta-galactosidase from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Created with Snap36721091451822182552913283644004374735105465836196566927589sp|T2KPJ7|PLH8_FORAG7544sp|P05804|BGLR_ECOLI16393sp|P77989|BGAL_THEP31393sp|P26257|BGAL_THETU22586sp|A7LXS9|BGH2A_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPJ7 1.08e-84 7 589 56 682
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
P05804 3.15e-42 7 544 30 593
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
P77989 1.41e-38 16 393 29 412
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
P26257 2.99e-37 1 393 1 413
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1
A7LXS9 2.14e-34 22 586 74 701
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000003 0.000050 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000084_02303.