logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000084_02321

You are here: Home > Sequence: MGYG000000084_02321

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger formicilis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger formicilis
CAZyme ID MGYG000000084_02321
CAZy Family GH3
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
999 MGYG000000084_12|CGC2 108958.47 4.3839
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000084 3006488 Isolate United Kingdom Europe
Gene Location Start: 45829;  End: 48828  Strand: -

Full Sequence      Download help

MDDLKMQKQT  LKKAYKKTKR  KHITPWKILA  IICAVVMIVS  IPLSILLQKF  DNTMAARFGG60
SFWKLQNEDA  NAQYYTSDFN  SAEEMVNYGL  ALTQQVEAEG  AALLMNNNNA  LPLAADAKVS120
TFSSSSVNLV  YGGTGSGNID  ASTADTLRTA  LEKVGVTVNP  TLWDFYTVGA  GKDYARSKSG180
TVAKSSEVTA  EVPWDVYTDE  VKDSVAQYGD  AAIVTLSRVG  GEGADLSYGE  VNYLALDENE240
KAMLQNVAEM  KKNGTVKKTI  LLINSANALQ  VDFLKNNEYD  IDAALWIGDV  GISGINAVAE300
ILTGKVNPSG  SLVDTYCYDN  FSAPAMWNFT  PTTYEGYVEG  GDVSAKAKSY  MIYQEGIYVG360
YKYYETRYED  FVTGNGNAGD  YAYGDIVAYP  FGYGMSYTNF  DMSDMNVSYN  AADDTYTVTV420
KVTNTGDMAG  KKTVQVYVQS  PYTDYDKENG  VEKSAVSLVG  FGKTGMIEPG  ASETLSMTVN480
KRDIASYDTY  GAGTYILDAG  DYYFTAATDA  HNAVNNILAA  KGYTVESTNG  KMTADGNADL540
TYTWTEDALD  TTTYATSENG  TAITNQLSSA  DPNLYEGIEE  TVTWLSRSDW  NGTLPTETVK600
LALTELLKKD  LKDIRYDPAD  YESVDMPTLG  AKNGVKLYDM  IGLDYNDPKW  DELLDQMTFD660
EMNSLIGDAF  HWTMPVKSVE  APGTRDENGP  QGLTASLLGN  DKSQLTATAF  TSEDVMAATF720
NTEIMTEIGK  VIGNNCLEAD  IACLYGPGNN  IHRTPYGGRN  FEYYSEDGFL  SGMMSAYEVK780
AIQDKGVHVV  MKHFALNDCE  QDRIGLGVWL  NEQAAREVYL  KAFQAPVEVG  NANGVMIAYT840
RWGAVWSGGN  YGLVTGILRN  EWGCDGMVIT  DNVLTQYVNG  PDGVLAGVSI  YDAMMSFVTD900
TLPKYKNDPV  IVTAMREACH  HNLYAIANSC  GMNGVGADTT  IKVTRPTVVT  MSIIIACAST960
FFCLLGIVMW  IIGGIKFRKT  EEYKAYKDFK  KSLKAAKKA999

Enzyme Prediction      help

No EC number prediction in MGYG000000084_02321.

CAZyme Signature Domains help

Created with Snap4999149199249299349399449499549599649699749799849899949697876GH3
Family Start End Evalue family coverage
GH3 697 876 1.1e-43 0.7962962962962963

CDD Domains      download full data without filtering help

Created with Snap4999149199249299349399449499549599649699749799849899949704871BglX103361Glyco_hydro_3_C291488PRK15098707871Glyco_hydro_3433510Fn3-like
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 1.25e-24 704 871 77 248
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 8.43e-22 103 361 3 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
PRK15098 PRK15098 4.84e-17 291 488 574 734
beta-glucosidase BglX.
pfam00933 Glyco_hydro_3 1.22e-15 707 871 85 254
Glycosyl hydrolase family 3 N terminal domain.
pfam14310 Fn3-like 6.64e-12 433 510 2 71
Fibronectin type III-like domain. This domain has a fibronectin type III-like structure. It is often found in association with pfam00933 and pfam01915. Its function is unknown.

CAZyme Hits      help

Created with Snap499914919924929934939944949954959964969974979984989994925983QRT29488.1|GH325983QHB23095.1|GH325983QEI30583.1|GH326963AXA81839.1|GH316946QHZ46305.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
QRT29488.1 0.0 25 983 25 983
QHB23095.1 0.0 25 983 25 983
QEI30583.1 0.0 25 983 25 983
AXA81839.1 7.36e-306 26 963 11 976
QHZ46305.1 8.38e-235 16 946 2 922

PDB Hits      download full data without filtering help

Created with Snap4999149199249299349399449499549599649699749799849899949989285WUG_A6498872X42_A6498872X40_A6528857MS2_A6548715WAB_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5WUG_A 1.50e-67 98 928 45 800
Expression,characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii],5WVP_A Expression, characterization and crystal structure of a novel beta-glucosidase from Paenibacillus barengoltzii [Paenibacillus barengoltzii]
2X42_A 3.57e-34 649 887 3 263
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with alpha-D-glucose [Thermotoga neapolitana DSM 4359]
2X40_A 3.57e-34 649 887 3 263
Structureof beta-glucosidase 3B from Thermotoga neapolitana in complex with glycerol [Thermotoga neapolitana DSM 4359],2X41_A Structure of beta-glucosidase 3B from Thermotoga neapolitana in complex with glucose [Thermotoga neapolitana DSM 4359]
7MS2_A 1.65e-32 652 885 7 246
ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
5WAB_A 3.76e-32 654 871 9 232
CrystalStructure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_B Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_C Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703],5WAB_D Crystal Structure of Bifidobacterium adolescentis GH3 beta-glucosidase [Bifidobacterium adolescentis ATCC 15703]

Swiss-Prot Hits      download full data without filtering help

Created with Snap499914919924929934939944949954959964969974979984989994995871sp|P15885|BGLS_RUMAL90871sp|P16084|BGLS_BUTFI657871sp|F6C6C1|APY_BIFBA657871sp|E7CY69|APY_BIFLN652885sp|P14002|BGLB_ACET2
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P15885 1.42e-74 95 871 15 696
Beta-glucosidase OS=Ruminococcus albus OX=1264 PE=3 SV=1
P16084 3.26e-65 90 871 29 769
Beta-glucosidase A OS=Butyrivibrio fibrisolvens OX=831 GN=bglA PE=3 SV=1
F6C6C1 2.96e-32 657 871 12 232
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium breve (strain ACS-071-V-Sch8b) OX=866777 GN=HMPREF9228_1477 PE=1 SV=1
E7CY69 6.87e-32 657 871 12 232
Exo-alpha-(1->6)-L-arabinopyranosidase OS=Bifidobacterium longum OX=216816 GN=apy PE=1 SV=1
P14002 9.02e-32 652 885 7 246
Thermostable beta-glucosidase B OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=bglB PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999925 0.000118 0.000000 0.000000 0.000000 0.000003

TMHMM  Annotations      download full data without filtering help

start end
26 48
952 974