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CAZyme Information: MGYG000000084_02322

You are here: Home > Sequence: MGYG000000084_02322

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger formicilis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger formicilis
CAZyme ID MGYG000000084_02322
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
639 MGYG000000084_12|CGC2 73138.98 5.9652
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000084 3006488 Isolate United Kingdom Europe
Gene Location Start: 49011;  End: 50930  Strand: -

Full Sequence      Download help

MRSTTKLMKN  WQFTGPDGKT  TAVDLPHTWN  NIDGQDGGND  YWRGTCIYKT  QFTAPAFDKD60
TQQVWLQFEG  VNASAKVTLN  GVEVARHDGG  YSTFRADVTA  LLADSNELIV  EADNSKNDRV120
YPQKADFTFY  GGIYRDVSLL  VVNRNHIALD  YLGGPGVQIT  PTVNGANADI  EVKTWMEGDG180
EVEFSIYDAA  GAEVLTGKGL  DTTVTLEHPH  LWDGVRDPYL  YTCAVRLVLN  GEVQDEVRQR240
FGVRSFSVDP  KRGFFLNGRP  YPLHGVSRHQ  DRKGLGNAIT  REMHDEDMQL  IKELGANTIR300
LAHYQHDQYF  YDLCDEAGMV  VWAEIPYISE  HMPNGRENTI  SQMKELIVQN  YNHACIVCWG360
VSNEITISTK  DNRDMRDNHH  VLNDLCHEMD  KTRLTTLACY  AMCGPFNPVA  HITDLVSWNL420
YLGWYVPGLF  LNDLWMDFFH  LCYPNRALGF  SEYGAEGMPN  LHSSHPRRGD  HTEEYQAIYH480
EYMLRCFDRH  KWLWATHVWN  MYDFAADARD  QGGEPGMNHK  GLVTFDRKTK  KDSFYIYKAW540
WSDEPFVHIC  SKRYADRTEN  EIEVKVYSNQ  KQVSLYVNGE  KLAEQEGEHI  FKFRVKLNGE600
TKVQAVAGDS  IDDAVFRKVD  APNPDYKLTK  KKSTSANWV639

Enzyme Prediction      help

EC 3.2.1.31

CAZyme Signature Domains help

Created with Snap3163951271591912232552873193513834154474795115435756072588GH2
Family Start End Evalue family coverage
GH2 2 588 3.2e-101 0.6715425531914894

CDD Domains      download full data without filtering help

Created with Snap31639512715919122325528731935138341544747951154357560711540PRK101501365LacZ45394ebgA254541Glyco_hydro_2_C48364lacZ
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 2.44e-76 11 540 35 592
beta-D-glucuronidase; Provisional
COG3250 LacZ 1.27e-54 1 365 9 407
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 2.27e-35 45 394 110 471
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836 Glyco_hydro_2_C 4.18e-25 254 541 8 298
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK09525 lacZ 2.26e-17 48 364 124 462
beta-galactosidase.

CAZyme Hits      help

Created with Snap3163951271591912232552873193513834154474795115435756071639AXA81840.1|GH21639CBK98599.1|GH21639QHB25281.1|GH21639QRT31684.1|GH21639QEI33686.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
AXA81840.1 0.0 1 639 1 639
CBK98599.1 0.0 1 639 1 639
QHB25281.1 0.0 1 639 1 640
QRT31684.1 0.0 1 639 1 640
QEI33686.1 0.0 1 639 1 640

PDB Hits      download full data without filtering help

Created with Snap31639512715919122325528731935138341544747951154357560716386MVG_A236386MVH_A16387KGZ_A16386MVF_A25833FN9_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MVG_A 3.57e-259 1 638 24 675
Crystalstructure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus],6MVG_B Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus],6MVG_C Crystal structure of FMN-binding beta-glucuronidase from Ruminococcus gnavus [[Ruminococcus] gnavus]
6MVH_A 1.70e-255 23 638 54 675
Crystalstructure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis],6MVH_B Crystal structure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis],6MVH_C Crystal structure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis],6MVH_D Crystal structure of FMN-binding beta-glucuronidase from Roseburia hominis [Roseburia hominis]
7KGZ_A 8.73e-252 1 638 1 642
ChainA, Beta-glucuronidase [Roseburia hominis],7KGZ_B Chain B, Beta-glucuronidase [Roseburia hominis]
6MVF_A 1.03e-190 1 638 24 676
Crystalstructure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_B Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_C Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_D Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_E Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6],6MVF_F Crystal structure of FMN-binding beta-glucuronidase from Facaelibacterium prausnitzii L2-6 [Faecalibacterium prausnitzii L2-6]
3FN9_A 1.04e-126 2 583 5 621
Crystalstructure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343],3FN9_B Crystal structure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343],3FN9_C Crystal structure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343],3FN9_D Crystal structure of putative beta-galactosidase from bacteroides fragilis [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Created with Snap31639512715919122325528731935138341544747951154357560717582sp|T2KPJ7|PLH8_FORAG62540sp|P05804|BGLR_ECOLI11395sp|P77989|BGAL_THEP318541sp|O18835|BGLR_CANLF10610sp|A7LXS9|BGH2A_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPJ7 8.92e-86 17 582 76 672
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
P05804 1.04e-43 62 540 82 588
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
P77989 8.47e-42 11 395 23 412
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
O18835 2.64e-38 18 541 72 626
Beta-glucuronidase OS=Canis lupus familiaris OX=9615 GN=GUSB PE=1 SV=1
A7LXS9 4.05e-38 10 610 50 725
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000055 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000084_02322.