logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000088_00303

You are here: Home > Sequence: MGYG000000088_00303

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus lutetiensis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus lutetiensis
CAZyme ID MGYG000000088_00303
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
381 40886.56 8.6399
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000088 1947463 Isolate United Kingdom Europe
Gene Location Start: 316708;  End: 317853  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000088_00303.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 23 314 5.3e-43 0.608

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 0.006 56 190 2 119
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQF42763.1 1.73e-269 1 381 1 381
SQG57482.1 1.30e-264 1 381 1 381
VTS99741.1 1.30e-264 1 381 1 381
VEB82906.1 1.01e-261 1 380 1 380
AEZ62727.1 2.12e-245 1 381 253 633

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.09e-12 53 311 106 296
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 1.15e-12 53 311 131 321
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 6.54e-12 53 311 131 321
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000088_00303.