logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000089_02784

You are here: Home > Sequence: MGYG000000089_02784

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-353 sp900066885
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; CAG-353; CAG-353 sp900066885
CAZyme ID MGYG000000089_02784
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
408 46729.84 4.9268
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000089 3052732 Isolate United Kingdom Europe
Gene Location Start: 53254;  End: 54480  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 78 350 2.6e-54 0.8481848184818482

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.22e-39 81 347 3 260
Glycosyl hydrolase family 10.
COG3693 XynA 8.93e-35 81 350 69 337
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 3.55e-32 81 348 46 306
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHF23854.1 9.41e-171 1 386 12 397
AHF24628.1 3.68e-170 1 406 1 405
QTE73953.1 1.21e-169 2 398 4 400
AHF25788.1 1.02e-168 1 386 6 391
QUC66401.1 1.98e-168 2 396 4 398

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D88_A 3.53e-29 5 404 54 416
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 8.22e-28 5 404 54 416
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
1VBR_A 4.00e-22 81 357 53 323
Crystalstructure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBR_B Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBU_A Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima],1VBU_B Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima]
3WUB_A 4.37e-22 81 265 49 233
Thewild type crystal structure of b-1,4-Xylanase (XynAS9) from Streptomyces sp. 9 [Streptomyces sp.],3WUE_A The wild type crystal structure of b-1,4-Xylanase (XynAS9) with xylobiose from Streptomyces sp. 9 [Streptomyces sp.]
3WUF_A 4.37e-22 81 265 49 233
Themutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) from Streptomyces sp. 9 [Streptomyces sp.],3WUG_A The mutant crystal structure of b-1,4-Xylanase (XynAS9_V43P/G44E) with xylobiose from Streptomyces sp. 9 [Streptomyces sp.]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q60041 4.86e-23 81 357 72 342
Endo-1,4-beta-xylanase B OS=Thermotoga neapolitana OX=2337 GN=xynB PE=3 SV=1
D5EY13 4.95e-21 69 330 62 344
Endo-1,4-beta-xylanase/feruloyl esterase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyn10D-fae1A PE=1 SV=1
B4XVN1 1.12e-20 81 265 87 271
Endo-1,4-beta-xylanase A OS=Streptomyces sp. OX=1931 GN=xynAS9 PE=1 SV=1
Q00177 4.82e-20 81 259 74 255
Endo-1,4-beta-xylanase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnC PE=1 SV=1
P26514 2.37e-19 85 273 94 284
Endo-1,4-beta-xylanase A OS=Streptomyces lividans OX=1916 GN=xlnA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000078 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000089_02784.