logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000093_00353

You are here: Home > Sequence: MGYG000000093_00353

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Klebsiella_A grimontii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella_A; Klebsiella_A grimontii
CAZyme ID MGYG000000093_00353
CAZy Family PL42
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
963 MGYG000000093_1|CGC10 106654.3 5.1273
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000093 6212272 Isolate United Kingdom Europe
Gene Location Start: 342381;  End: 345272  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000093_00353.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL42 553 850 4.3e-51 0.9695945945945946

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam15892 BNR_4 1.26e-36 572 840 5 268
BNR repeat-containing family member. BNR_4 is a family which carries the unique sequence motif SxDxGxTW which is so characteristic of the repeats of the BNR family, pfam02012. It is unclear whether or not this unit is repeated throughout the sequences of this family, but if it is then the family is likely to be bacterial neuraminidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHS48653.1 0.0 1 963 1 963
QHO86455.1 2.92e-284 126 960 17 846
QOX00791.1 4.19e-166 160 959 198 1064
QHQ32840.1 5.32e-155 131 960 189 1006
QHQ32130.1 7.46e-155 131 960 189 1006

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MUK_A 1.75e-28 619 938 87 407
GlycosideHydrolase BT3686 [Bacteroides thetaiotaomicron VPI-5482],5MUL_A Glycoside Hydrolase BT3686 bound to Glucuronic Acid [Bacteroides thetaiotaomicron VPI-5482]
7ESL_A 8.02e-15 554 817 24 293
ChainA, L-rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum]
7ESK_A 1.41e-14 554 817 24 293
ChainA, L-Rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum],7ESM_A Chain A, L-rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum]
7ESN_A 1.82e-13 554 817 26 295
ChainA, L-Rhamnose-alpha-1,4-D-glucuronate lyase [Fusarium oxysporum]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999785 0.000238 0.000007 0.000001 0.000000 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000093_00353.