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CAZyme Information: MGYG000000093_00452

You are here: Home > Sequence: MGYG000000093_00452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Klebsiella_A grimontii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella_A; Klebsiella_A grimontii
CAZyme ID MGYG000000093_00452
CAZy Family GH0
CAZyme Description HTH-type transcriptional activator RhaR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
768 MGYG000000093_1|CGC13 89257.54 9.5805
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000093 6212272 Isolate United Kingdom Europe
Gene Location Start: 446807;  End: 449113  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000093_00452.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 4.19e-26 419 766 85 427
Beta-xylosidase [Carbohydrate transport and metabolism].
COG2207 AraC 3.87e-24 139 268 1 127
AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
smart00342 HTH_ARAC 8.14e-24 177 260 1 84
helix_turn_helix, arabinose operon control protein.
pfam12833 HTH_18 3.48e-19 183 262 1 81
Helix-turn-helix domain.
COG4977 GlxA 2.04e-17 145 267 206 326
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHI88133.1 0.0 1 768 1 768
QTP44130.1 0.0 1 768 1 768
QTP37973.1 0.0 1 768 1 768
QLT88586.1 0.0 1 768 1 768
QQQ23753.1 0.0 1 768 1 768

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SWI_A 3.32e-11 178 260 23 105
TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
3OIO_A 2.22e-07 162 265 8 111
Crystalstructure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum [Chromobacterium violaceum]
1BL0_A 3.20e-07 163 260 13 110
MultipleAntibiotic Resistance Protein (Mara)DNA COMPLEX [Escherichia coli]
1XS9_A 3.42e-07 163 260 16 113
ChainA, Multiple antibiotic resistance protein marA [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6GKK1 5.44e-41 24 737 21 714
Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q5HJR8 1.76e-40 24 737 21 714
Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2
Q936F1 3.16e-40 24 737 21 714
Uncharacterized HTH-type transcriptional regulator OS=Staphylococcus aureus OX=1280 PE=4 SV=2
Q8NYT6 4.23e-40 24 737 21 714
Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q6GD21 4.23e-40 24 737 21 714
Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000046 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000093_00452.