You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000000093_04053
You are here: Home > Sequence: MGYG000000093_04053
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Klebsiella_A grimontii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella_A; Klebsiella_A grimontii | |||||||||||
| CAZyme ID | MGYG000000093_04053 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 237651; End: 239033 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 62 | 425 | 5.8e-86 | 0.9230769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 2.23e-58 | 25 | 427 | 72 | 525 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 2.09e-47 | 64 | 423 | 1 | 304 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 3.54e-31 | 37 | 340 | 48 | 320 | polygalacturonase |
| PLN03003 | PLN03003 | 9.31e-30 | 37 | 340 | 25 | 301 | Probable polygalacturonase At3g15720 |
| PLN02218 | PLN02218 | 1.07e-29 | 27 | 439 | 60 | 424 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHI89308.1 | 0.0 | 1 | 460 | 1 | 460 |
| BAS39142.1 | 0.0 | 1 | 460 | 1 | 460 |
| QQQ22073.1 | 0.0 | 1 | 460 | 1 | 460 |
| QLO79880.1 | 0.0 | 1 | 460 | 1 | 460 |
| AWT19509.1 | 0.0 | 1 | 460 | 1 | 460 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 1.18e-39 | 54 | 341 | 26 | 315 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 3JUR_A | 4.49e-28 | 30 | 371 | 22 | 398 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 2.98e-27 | 31 | 325 | 40 | 355 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 1.88e-20 | 52 | 398 | 171 | 538 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4MXN_A | 3.34e-10 | 50 | 208 | 34 | 185 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26509 | 1.09e-38 | 54 | 341 | 52 | 341 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| P18192 | 2.08e-38 | 54 | 341 | 52 | 341 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P20041 | 9.43e-36 | 44 | 342 | 63 | 401 | Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1 |
| P58598 | 2.48e-35 | 57 | 343 | 78 | 404 | Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pglA PE=3 SV=1 |
| A7PZL3 | 8.39e-33 | 52 | 393 | 77 | 423 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000317 | 0.998962 | 0.000164 | 0.000220 | 0.000165 | 0.000158 |