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CAZyme Information: MGYG000000095_01450

You are here: Home > Sequence: MGYG000000095_01450

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066755 sp902363085
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp902363085
CAZyme ID MGYG000000095_01450
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
496 MGYG000000095_3|CGC8 55311.98 4.7647
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000095 5524222 Isolate United Kingdom Europe
Gene Location Start: 399595;  End: 401085  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000095_01450.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 182 467 1.7e-50 0.84

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.41e-24 170 403 121 393
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 2.13e-09 209 405 39 236
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 6.15e-07 216 439 142 378
polygalacturonase ADPG
PLN03010 PLN03010 8.69e-07 205 324 118 236
polygalacturonase
PLN02793 PLN02793 2.27e-06 205 467 122 393
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJD84919.1 2.16e-127 28 473 45 477
QTH41144.1 1.30e-119 26 473 35 470
QNK57055.1 1.52e-115 28 464 35 458
AZS17007.1 1.01e-114 13 487 30 488
QIU92674.1 2.90e-56 83 486 96 482

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MXN_A 5.42e-09 167 314 57 215
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P35336 5.32e-09 224 440 174 399
Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1
Q8RY29 8.62e-09 220 486 149 427
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P43212 7.22e-08 227 440 146 371
Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1
P48978 8.72e-08 224 440 182 409
Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1
P49062 4.13e-06 249 440 171 353
Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000037 0.000004 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000095_01450.