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CAZyme Information: MGYG000000095_04823

You are here: Home > Sequence: MGYG000000095_04823

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species GCA-900066755 sp902363085
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; GCA-900066755; GCA-900066755 sp902363085
CAZyme ID MGYG000000095_04823
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
752 MGYG000000095_28|CGC1 85743.56 5.3969
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000095 5524222 Isolate United Kingdom Europe
Gene Location Start: 11766;  End: 14024  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000095_04823.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 94 436 9.9e-42 0.9353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.14e-10 159 318 211 393
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.58e-06 182 438 93 290
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 7.62e-06 149 366 139 343
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93866.1 6.60e-224 1 741 1 713
BCJ98361.1 2.61e-192 1 741 1 713
APA66227.1 1.08e-50 3 445 42 496
ANW95387.1 2.16e-50 3 444 45 499
SDS06655.1 6.20e-49 3 445 55 509

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000095_04823.