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CAZyme Information: MGYG000000098_00820

You are here: Home > Sequence: MGYG000000098_00820

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides bouchesdurhonensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides bouchesdurhonensis
CAZyme ID MGYG000000098_00820
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
749 84188.08 4.8348
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000098 4868436 Isolate Canada North America
Gene Location Start: 102078;  End: 104327  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000098_00820.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 457 728 2.8e-36 0.7415384615384616

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.16e-19 427 668 118 399
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.90e-13 459 733 46 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 1.39e-10 504 678 167 318
polygalacturonase
PLN03003 PLN03003 3.89e-07 459 678 108 299
Probable polygalacturonase At3g15720
PLN02793 PLN02793 5.71e-07 459 678 137 338
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL02017.1 9.96e-260 1 738 1 732
QRP58902.1 1.10e-220 22 735 44 760
QQA09745.1 1.10e-220 22 735 44 760
QQT79214.1 1.10e-220 22 735 44 760
ASW16403.1 1.10e-220 22 735 44 760

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A2QW66 2.59e-11 453 708 124 378
Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxA PE=3 SV=1
Q27UB2 2.59e-11 453 708 124 378
Exopolygalacturonase A OS=Aspergillus niger OX=5061 GN=pgxA PE=3 SV=1
P49062 1.78e-10 459 695 131 352
Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1
B0YAA4 1.87e-09 463 699 141 374
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgxB PE=3 SV=2
Q4WBK6 1.87e-09 463 699 141 374
Probable exopolygalacturonase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgxB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000483 0.996656 0.002281 0.000202 0.000180 0.000169

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000098_00820.