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CAZyme Information: MGYG000000099_03334
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Flavonifractor plautii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Flavonifractor; Flavonifractor plautii | |||||||||||
| CAZyme ID | MGYG000000099_03334 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 112294; End: 121674 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 2.03e-76 | 1814 | 2342 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG4646 | COG4646 | 7.08e-27 | 2485 | 2674 | 441 | 637 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| COG0827 | YtxK | 3.04e-12 | 1628 | 1791 | 168 | 341 | Adenine-specific DNA methylase [Replication, recombination and repair]. |
| cd18011 | DEXDc_RapA | 2.34e-10 | 2288 | 2536 | 1 | 173 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| smart00487 | DEXDc | 3.03e-10 | 2286 | 2389 | 7 | 110 | DEAD-like helicases superfamily. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 0.0 | 1522 | 3107 | 1548 | 3188 |
| QIW86704.1 | 1.14e-318 | 1522 | 3107 | 1616 | 3256 |
| QIW86628.1 | 1.14e-318 | 1522 | 3107 | 1616 | 3256 |
| AXF51455.1 | 4.00e-309 | 1499 | 3125 | 1757 | 3447 |
| AEY69616.1 | 2.52e-308 | 1522 | 3125 | 1689 | 3354 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 3.62e-43 | 1541 | 2875 | 51 | 1567 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000062 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |