CAZyme Information: MGYG000000101_00164

Basic Information

• Species: Micrococcus luteus
• Lineage: Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Micrococcus; Micrococcus luteus
• CAZyme ID: MGYG000000101_00164
• CAZy Family: GT4
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
597	MGYG000000101_1|CGC1	63112.08	10.2007

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000101	2543489	Isolate	Canada	North America

• Gene Location: Start: 178898; End: 180691 Strand: -

Full Sequence      

MAGARVRRWAGRARIVGERAAATAGDAGASALRAARGARGAATLPERTWRAADVHVPDAA
AALPLPAAAALRRALTGVRVPSVDAFSPLGPRPADAPAVLLLPVDDGPAARGWSVEAAAE
LAARRCADLQMPAGAPGLHTVLVTDPASRGALIAALRPAGARLPGVLVVACPDPATAAGR
ARALAALGLVDAVLAPEGTRLDPALPSVAARAGRAVIGPDRAAETWERLAAAGRAARLDS
LTPAEATGPPAAPGPRVRVTAEPRRVVVAGHDLKFAGALMERLRADGHEVRVDAWLGHAR
HDAERSRALAAWADVVHCEWSLGNLAWYSRHLDSPHRTTRLTSRLHLQEAGTAFPSRVRQ
DALDEWVFVAEHVRAQVLRDTRFPAARTSVVPNAVAVPPTLPDGDDDRRFVLGLVGVLPE
RKGLHRALDLLAVLRRTEPRFTLRIRGHHPEEVGWMAQRPAAAAYYRAQLRRIETDPMLA
GAVAWDPHGPDMPAWYARVGVALSVSDFESFHFTLPDGAAHGCLPAALAWAGADLLYPAA
WLSPDVATMADALRRATADARAWRSAVAQARRDVAHTYAEEDVVPALVCRILGGTAT

Enzyme Prediction     

No EC number prediction in MGYG000000101_00164.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd03801	GT4_PimA-like	1.43e-14	279	588	23	362	phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
COG0438	RfaB	1.02e-08	266	584	38	367	Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].
cd03819	GT4_WavL-like	1.08e-07	369	572	133	334	Vibrio cholerae WavL and similar sequences. This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
cd03811	GT4_GT28_WabH-like	2.00e-05	265	452	1	231	family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
cd03807	GT4_WbnK-like	3.18e-05	253	584	40	354	Shigella dysenteriae WbnK and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AYO49424.1	0.0	1	597	16	612
QDW17184.1	0.0	1	596	16	610
SQG49381.1	0.0	2	597	4	598
ACS30427.1	0.0	2	597	17	611
QHG60976.1	0.0	1	597	3	598

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999775	0.000237	0.000004	0.000001	0.000000	0.000001

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000101_00164.