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CAZyme Information: MGYG000000101_01886

You are here: Home > Sequence: MGYG000000101_01886

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Micrococcus luteus
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Micrococcus; Micrococcus luteus
CAZyme ID MGYG000000101_01886
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
292 MGYG000000101_9|CGC1 30002.94 9.9994
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000101 2543489 Isolate Canada North America
Gene Location Start: 12024;  End: 12902  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000101_01886.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00877 NLPC_P60 1.48e-30 187 267 3 81
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PRK13914 PRK13914 7.42e-21 188 275 381 463
invasion associated endopeptidase.
COG0791 Spr 1.91e-19 175 277 77 181
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].
NF033742 NlpC_p60_RipB 1.26e-17 188 266 92 179
NlpC/P60 family peptidoglycan endopeptidase RipB.
NF033741 NlpC_p60_RipA 8.61e-14 188 292 343 454
NlpC/P60 family peptidoglycan endopeptidase RipA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGY89853.1 1.19e-181 1 292 1 292
QGS21667.1 1.32e-178 1 292 1 292
QGY83236.1 5.79e-178 1 292 1 294
QDW16963.1 5.79e-178 1 292 1 294
AWD24492.1 2.55e-176 1 292 1 292

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7CFL_A 1.01e-13 172 277 16 120
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
4HPE_A 5.78e-12 169 266 183 282
ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630]
6B8C_A 8.49e-12 177 266 32 119
Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium]
2HBW_A 5.38e-10 173 272 101 196
ChainA, NLP/P60 protein [Trichormus variabilis ATCC 29413]
2EVR_A 6.02e-10 185 292 123 227
ChainA, COG0791: Cell wall-associated hydrolases (invasion-associated proteins) [Nostoc punctiforme PCC 73102],2FG0_A Chain A, COG0791: Cell wall-associated hydrolases (invasion-associated proteins) [Nostoc punctiforme PCC 73102],2FG0_B Chain B, COG0791: Cell wall-associated hydrolases (invasion-associated proteins) [Nostoc punctiforme PCC 73102]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31852 4.01e-20 49 292 159 414
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
O07532 4.16e-18 45 277 238 471
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
Q01839 4.08e-16 108 275 314 506
Probable endopeptidase p60 OS=Listeria welshimeri OX=1643 GN=iap PE=3 SV=1
P21171 5.14e-16 177 275 373 466
Probable endopeptidase p60 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=iap PE=1 SV=2
Q01836 9.01e-16 177 275 356 449
Probable endopeptidase p60 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=iap PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002547 0.995002 0.000485 0.001436 0.000278 0.000237

TMHMM  Annotations      download full data without filtering help

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17 39