CAZyme Information: MGYG000000104_00479

Basic Information

• Species: Clostridium cuniculi
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium cuniculi
• CAZyme ID: MGYG000000104_00479
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
850		91511.7	4.1469

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000104	3679160	Isolate	Canada	North America

• Gene Location: Start: 240018; End: 242570 Strand: +

Full Sequence      

MKRKKIMAMIMATLISSSLILGNATNTYAADSTIQAKAIVNEMTIEQKIGQMLMPDFRQW
KMEGEDNLSNFTTMNEEVAKIIDDFDLGGVILFAQNVETTEQTTQLTHDLQQVIANDESN
DIPLLISIDQEGGIVTRLGTGTSLPGNMALGATKNELSSYRAGTVLGKELDSLGINVNFA
PSLDVNNNPANPVIGLRSFSSDAELVGKLGVQMINGIQDQGVSAAAKHFPGHGDTATDSH
YGLPLVDKSYEEIKEVELKPFQEAVDNGVDMIMTAHIQYPQIESDTYTSKNDGTEITLPA
TLSDDILTGVLREDMGYDGVIVTDALNMDAIAANFGEVEAVIMTIKAGADIALMPTVLRS
TDDIHKLQAIVDGVKAAVESGELTMAELDDSVERIIKLKIDRGIMDVNNDTKTLEEKIAN
AKNIVGSEENRLIEREVSAEAVTVVKSENNILPLNPKEGENVLLIAPYNNELPGMKYGVT
RLIAEGKLNSVNIETHRYSNGNLLTDELKNKIEDADYVIVISEMGSYSHLNANHWITAGP
NSIVDYANELNKDSVIVSVGKPYDVAAHKTSKAEVVVYGYKGMDPTEADGGLTPTQTFGP
NIPAAMDVIFGAYEAQGTLPVDIPQVDETGSIITGENAYEYGFGITDLTSVGISTSINEE
EVKSLEEFDVKLSLSEIEGLKSDNYSLKVNFNNVDFEVVSVKSNDEKLSVVDYLVDGSLL
TINLSDINEDALTDVTITLKAIGEAKTDAVIFDDIKVLDGKDREFTTSGTYSTINIVEDN
NTNNPDVPVEPEAPIEPEKPSNQGNSSKPGNTSKPSSGKLPNTGGTSAVAVGIFGTLIAT
AGAFISRKKK

Enzyme Prediction     

No EC number prediction in MGYG000000104_00479.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	116	354	1.1e-66	0.9861111111111112

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00933	Glyco_hydro_3	6.79e-105	44	398	1	316	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	5.89e-99	43	474	1	369	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337	PRK05337	6.30e-45	88	354	27	279	beta-hexosaminidase; Provisional
PRK15098	PRK15098	6.13e-15	139	467	115	418	beta-glucosidase BglX.
PLN03080	PLN03080	3.01e-08	298	646	272	632	Probable beta-xylosidase; Provisional

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AYE33655.1	0.0	1	774	1	774
QAS61817.1	0.0	1	774	1	774
AQW22651.1	1.60e-270	4	790	4	789
ALG47650.1	5.18e-269	29	788	28	787
BAB79972.1	2.95e-268	4	790	4	789

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3BMX_A	6.52e-181	25	645	24	634	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	2.21e-180	29	645	2	608	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	4.46e-180	25	645	28	638	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
6K5J_A	1.54e-92	43	404	11	342	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A	8.03e-77	41	628	5	532	Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	3.57e-180	25	645	24	634	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	4.85e-88	43	623	16	596	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q31G32	3.18e-40	67	354	17	290	Beta-hexosaminidase OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=nagZ PE=3 SV=1
A9M1Z4	2.16e-37	67	354	14	288	Beta-hexosaminidase OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=nagZ PE=3 SV=1
Q3SKU2	2.81e-37	87	354	28	282	Beta-hexosaminidase OS=Thiobacillus denitrificans (strain ATCC 25259) OX=292415 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000226	0.999113	0.000171	0.000179	0.000153	0.000133

TMHMM  Annotations     

start	end
824	846