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CAZyme Information: MGYG000000104_02263

You are here: Home > Sequence: MGYG000000104_02263

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium cuniculi
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium cuniculi
CAZyme ID MGYG000000104_02263
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
444 MGYG000000104_14|CGC1 49473.66 4.8622
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000104 3679160 Isolate Canada North America
Gene Location Start: 90787;  End: 92121  Strand: -

Full Sequence      Download help

MAEKGRLKVQ  CFVGDTYIPV  DGSKAVLVPS  SGQTGESKEV  NLVTNSSGES  QTIELDAPPL60
EYSQEPSQPT  PYSLYDLRVE  REGFQVLVIN  GIQIFPGQTA  IQKCQLIENT  SSRNFRADVI120
NISPNTLNGN  FPAKIPEEVD  KPLPPPTSGV  VLPKPVVPEF  ITVHAGTPSN  TSAPNYTVAY180
KDYIKNVASC  EIYSTWPDST  IRANIYAIIS  FTLNRIYTEW  YRGKGKDYDI  TNSTAYDHAF240
NYGRNIYDSI  SVVVDDIFSS  YVRRIGRKQP  LLTQYCDGKN  VKCPGWMTQW  GSKYLGDEGK300
TPYEILTTYY  GNDIELVTAE  VVKGSPSSYP  GYDLTVGSTG  TEVETIQDQL  NRIAQNYPLI360
PKSAVDGVYG  PRTEEAVKVF  QSVFNLPQTG  VVDYATWYRI  SDVYVGVTRI  AELRSSIKQR420
TFVPPLSFDI  LNSKQVPKMN  YFDD444

Enzyme Prediction      help

No EC number prediction in MGYG000000104_02263.

CDD Domains      download full data without filtering help

Created with Snap22446688111133155177199222244266288310333355377399421339400PG_binding_1334400PGRP329398PGRP
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 8.54e-15 339 400 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 3.35e-08 334 400 39 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 1.51e-06 329 398 116 181
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Created with Snap224466881111331551771992222442662883103333553773994211443QBJ74211.1|GH01441AYE34395.1|GH01441QAS59800.1|GH01441QSW20651.1|GH01441APF21924.1|GH0
Hit ID E-Value Query Start Query End Hit Start Hit End
QBJ74211.1 1.27e-250 1 443 1 444
AYE34395.1 2.98e-249 1 441 1 442
QAS59800.1 2.98e-249 1 441 1 442
QSW20651.1 5.01e-235 1 441 1 437
APF21924.1 7.24e-226 1 441 1 441

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000066 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000104_02263.