CAZyme Information: MGYG000000105_02414

Basic Information

• Species: Bacteroides clarus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus
• CAZyme ID: MGYG000000105_02414
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
876	MGYG000000105_4|CGC10	98805.89	7.3549

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000105	3966085	Isolate	Canada	North America

• Gene Location: Start: 473391; End: 476021 Strand: -

Full Sequence      

MNKILSITILTFSAVCVQAQTPGKATIKLSDTTLMHEMRATPSPLNGATVSDRAVSFQWP
LPASLNILRSGLDGAEENTPKKEIDKSKLRYFLRYSQSPAFGQENTVQTETLWPFFNPEQ
DLAPGTWYWQYGYVTDGKTEWSDTLQFTVEANPHKFCPPALKVVLKNLPAHHPRVWLDKD
EWDGFIKRSEGKIERKTYLKRADRVLATPMKSVNDINSDLAKGLTNEVQKNAMLTRESRR
IVDSEEANTDVLIRAYLLTKDRRYADEAVKRVKEMATWGDNKNVVGDFNEATLLSLCSMA
YDALYDVLDDATRQFLLNEIKDFGSSMYKHDINRLENHIADNHVWQMTFRILTMAAFTVY
GELPEADEWTDYCYNLWLARFPGLNKDGAWHNGDSYFHVNLRTLVEVPYFYTRLTGYNYF
SDPWYQGNALYVIYQQPPFSKSGGNGSSHQNILTPGGTRVGYADALARMTGNTYAADYVR
HISARQPDILEQGSTSKAGGLAWFRLQCDKPLPNGPGLKDLPMGHVFPQSGLASFSTDLD
DTGKSAMLSFRSSPYGSTSHAIANQNAFNTFWNGQSLFYSSGHHISFTDKHSIYCHRGTR
AHNTILVNGMGQRIGTEGYGWIPRYYVSDNISYVAGDASNAYGKVISPLWLLRGKQSNLE
YSPENGWDDTGLKTFRRHIVTLGKSGYSFIYDELEAAEPVTWSYLLHTVTNPMNVDKTKE
YVHVQATSKDGVSDAYLFSAGTVKTDTTDQFFVPAVNWLRADEKGRFKPYPNHWHFTATS
DKQKVYRFATIVYTHAKDKNAEAGQVAPKRLKDGSIQIGDWNIKANISIGGKPSFEVRNT
RKGCDASVSYKDYGATVVRDNGKTTELKDEVPELEI

Enzyme Prediction     

No EC number prediction in MGYG000000105_02414.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	541	694	2.5e-84	0.9807692307692307

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	32	510	1	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	8.42e-07	521	707	3	165	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
EPH20506.1	0.0	1	876	1	876
QUT44203.1	0.0	1	876	1	876
QRQ49816.1	0.0	1	876	1	876
QRQ49813.1	0.0	1	876	1	873
QUT44206.1	0.0	1	876	1	873

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	2.91e-292	4	876	5	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	2.17e-289	4	876	5	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	9.30e-44	48	796	5	738	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.68e-42	48	796	5	738	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000484	0.991970	0.006815	0.000256	0.000237	0.000205

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000105_02414.