CAZyme Information: MGYG000000105_02904

Basic Information

• Species: Bacteroides clarus
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides clarus
• CAZyme ID: MGYG000000105_02904
• CAZy Family: PL29
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
870		96352.01	4.7453

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000105	3966085	Isolate	Canada	North America

• Gene Location: Start: 373484; End: 376096 Strand: +

Full Sequence      

MNIKQLLLPAVCSLLLLPLQSCDDDADKQAQAEYMKEQVAAFEGTVDRLNASILCYQSLL
SGEIPVGITPIETGYKVELSGGNAYNIGAGEEVDAFFPLITISEKGNWAYSFDGSNYLDF
TDPSGKTLNAYSLEDIEAAYRSPQLQIDNEGFWKITCDGGTTYAYLSDTSRSRIAAFGGK
GTGVSSLFSDIVYNETAGKLSLTLGADKGLKDFPVISNFYLKVKGSEAEDGLTFFLNEER
KYEVETSDVVRTRIKAPDGWTVTLENDELSIKAPATTSATKTQNINIIITSSKQYQRTVT
LEAKLLNTTFDADYCNAWKEFVSGSENNVLLDFSYAGYMHGEVAPPEMEELIARGYKVFD
VTHYGAIPDDDKSDREAFLKALEAAGAKRTLNINEKNPDFSTIRMQVQGEKPLNAIIYFP
KGNYILQTEEEVNQSISLTMGGFLIKGAGRNLTTLKMNAKNTMATPGDMWTCPTMIEIKN
YSGVDMKSDITEVTADTPKGGFEITVGSASKIKAGDWVCLYVKNNDPEFVAKEIAPHPIS
DLNAATSIVKDGAEIYDLHQVVSVNGNKVTFKEPIMHEVEAKYNWVIKEYKHYENVGVED
IAFEGKAEERFQHHESSSNNGSYDSEYKLIDLVRLTDSWMRRVNFVSVSEAASLVSCANV
SAYDIEISGNRGHSAVRSNSSSRVFIGKVYDHSSGYRIPKAGELAEWMENAGQYHGCGVS
KPSMGAVIWNVQWGDDACYEAHASQPRATLIDRCTGAFIPSRQGGDRYEVPNHLGDLIIW
NMNATRTGYESNWNNQFVWWDKSSAWSKTVPPVIVGFHGASINFAETFISDVPQNKRIES
QGSRVEPYSLYEAQLRRRLGYVPAWLTALK

Enzyme Prediction     

No EC number prediction in MGYG000000105_02904.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL29	358	691	1.6e-101	0.9966777408637874

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16315	DUF4955	6.36e-78	712	869	1	149	Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam16378	DUF4988	2.94e-21	35	205	8	173	Domain of unknown function. This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Alistipes species. The function of this family remains unknown. The N-terminus of this model has been clipped by ~30 residues as it was capturing parts of collagen sequences, pfam01391.
pfam12708	Pectate_lyase_3	1.00e-06	359	456	2	69	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDM10828.1	1.58e-267	2	870	5	833
QUT78855.1	1.58e-267	2	870	5	833
QNL40303.1	4.49e-267	2	870	5	833
QIU93728.1	9.56e-250	10	870	7	852
QRQ54963.1	1.61e-242	2	870	5	862

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000021	0.019870	0.980128	0.000007	0.000011	0.000009

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000105_02904.