CAZyme Information: MGYG000000106_00870

Basic Information

• Species: Enterococcus_D gallinarum
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_D; Enterococcus_D gallinarum
• CAZyme ID: MGYG000000106_00870
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YteR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
384	MGYG000000106_2|CGC8	44041.17	5.1257

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000106	3151412	Isolate	Canada	North America

• Gene Location: Start: 408485; End: 409639 Strand: +

Full Sequence      

MEEIRQFLDQVIAHSSPEAPIWNQEARLANHPIRWSYIDGCMILAIQYMFNATQDENYLA
FVETFIDHYIDEAGNPLGYDEKEYNCDAINEGKLLFQLYAITKKSKYRKALDNLYRQVLL
QPRTKEGSMWHKLVYPQQVWLDGLYMVQPFAIQYQLTFGNSADVSDVIGQFKNVMESMKD
PRTGLLYHGYDCTRTAFWAHPETGCSANFWTRSLGWYAMALVDTLEVLLSHEGYLQEKQQ
LQRYLTELVGAVMAYQDPKTSLFFQVTDRPDGEDNYLETSGSAALSYVMLKASRLAILPS
QYKIIGETILRALVKHKLVIKNGEFTLKDICLVAGLGGMPGKGNYKIRDGSYEYYISEPV
VNDDAKGIGPFVYAYSEWLQLQNQ

Enzyme Prediction     

No EC number prediction in MGYG000000106_00870.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	33	379	7.3e-95	0.963855421686747

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG4225	YesR	2.36e-84	34	381	33	356	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470	Glyco_hydro_88	1.70e-72	34	382	26	343	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QCT91350.1	1.65e-289	1	384	1	384
QGR82798.1	1.65e-289	1	384	1	384
AYY09443.1	4.74e-289	1	384	1	384
QOG25867.1	1.93e-288	1	384	1	384
ABX40590.1	2.50e-127	1	382	1	374

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4WU0_A	1.19e-88	35	378	23	358	StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A	2.65e-61	34	377	38	363	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	1.12e-60	34	377	28	353	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A	8.06e-10	122	316	146	331	ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A	4.39e-07	122	316	147	332	ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34559	1.45e-60	34	377	38	363	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6	1.75e-39	149	381	4	231	Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7	1.75e-39	149	381	4	231	24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000050	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000106_00870.