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CAZyme Information: MGYG000000107_00377

You are here: Home > Sequence: MGYG000000107_00377

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Klebsiella_A oxytoca
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella_A; Klebsiella_A oxytoca
CAZyme ID MGYG000000107_00377
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
412 MGYG000000107_1|CGC9 46846.59 6.6189
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000107 5859765 Isolate Canada North America
Gene Location Start: 436631;  End: 437869  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000107_00377.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 72 350 1.3e-116 0.996415770609319

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 4.69e-79 71 350 1 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
pfam16889 Hepar_II_III_N 0.006 67 160 42 133
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVL83198.1 4.25e-313 1 412 1 412
AKL26302.1 4.25e-313 1 412 1 412
APB44203.1 4.25e-313 1 412 1 412
AKL09358.1 4.25e-313 1 412 1 412
VEF68774.1 4.25e-313 1 412 1 412

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NFV_A 9.93e-73 45 362 21 340
Crystalstructure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.011965 0.507583 0.170773 0.273232 0.034355 0.002067

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000107_00377.