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CAZyme Information: MGYG000000108_03855

You are here: Home > Sequence: MGYG000000108_03855

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter freundii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
CAZyme ID MGYG000000108_03855
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
353 MGYG000000108_5|CGC9 39067.89 9.1984
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000108 4739906 Isolate Canada North America
Gene Location Start: 390458;  End: 391519  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000108_03855.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 78 287 3.1e-18 0.8091603053435115

CDD Domains      help

MGYG000000108_03855 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QFH82955.1 6.65e-266 2 353 9 360
QJT77950.1 6.65e-266 2 353 9 360
QHD96652.1 6.65e-266 2 353 9 360
QSB88785.1 6.65e-266 2 353 9 360
AXZ51001.1 6.65e-266 2 353 9 360

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YZP_A 7.88e-06 121 314 141 327
Crystalstructure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis [Bacillus licheniformis],4YZT_A Crystal structure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis complexed with cellotetraose [Bacillus licheniformis]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003724 0.680535 0.314535 0.000563 0.000316 0.000292

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000108_03855.