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CAZyme Information: MGYG000000110_00838
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Kluyvera sp902363335 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Kluyvera; Kluyvera sp902363335 | |||||||||||
| CAZyme ID | MGYG000000110_00838 | |||||||||||
| CAZy Family | PL22 | |||||||||||
| CAZyme Description | Oligogalacturonate lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 865032; End: 866204 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL22 | 234 | 381 | 4e-45 | 0.5547169811320755 |
| PL22 | 59 | 135 | 1.8e-22 | 0.7452830188679245 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14583 | Pectate_lyase22 | 2.00e-161 | 1 | 383 | 1 | 384 | Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. |
| COG0823 | TolB | 4.28e-10 | 1 | 383 | 58 | 403 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
| PRK04792 | tolB | 1.73e-08 | 244 | 382 | 225 | 338 | Tol-Pal system protein TolB. |
| PRK01742 | tolB | 5.76e-07 | 244 | 388 | 211 | 333 | Tol-Pal system protein TolB. |
| PRK04922 | tolB | 1.65e-06 | 244 | 382 | 211 | 324 | Tol-Pal system beta propeller repeat protein TolB. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIR27749.1 | 2.64e-266 | 1 | 389 | 1 | 389 |
| BBV66283.1 | 2.74e-266 | 1 | 387 | 1 | 387 |
| ASG63524.1 | 5.33e-266 | 1 | 389 | 1 | 389 |
| AUH05269.1 | 9.69e-142 | 1 | 381 | 1 | 382 |
| AUH00948.1 | 9.69e-142 | 1 | 381 | 1 | 382 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3PE7_A | 4.09e-137 | 1 | 381 | 1 | 382 | Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 3C5M_A | 7.02e-130 | 2 | 381 | 2 | 382 | Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q59418 | 6.83e-138 | 1 | 381 | 1 | 382 | Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2 |
| P21258 | 7.33e-135 | 1 | 381 | 1 | 382 | Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000039 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |