logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000112_01098

You are here: Home > Sequence: MGYG000000112_01098

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Actinomyces sp900323545
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Actinomyces; Actinomyces sp900323545
CAZyme ID MGYG000000112_01098
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
744 82949.24 4.5313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000112 3112947 Isolate Canada North America
Gene Location Start: 1308733;  End: 1310967  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH13 288 588 2.2e-162 0.9966777408637874
CBM48 138 228 1.6e-18 0.9078947368421053

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05402 PRK05402 0.0 23 744 1 726
1,4-alpha-glucan branching protein GlgB.
PRK14706 PRK14706 0.0 137 744 26 624
glycogen branching enzyme; Provisional
PRK14705 PRK14705 0.0 23 742 503 1223
glycogen branching enzyme; Provisional
PRK12313 PRK12313 0.0 115 743 4 629
1,4-alpha-glucan branching protein GlgB.
PRK12568 PRK12568 0.0 27 740 14 727
glycogen branching enzyme; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCT33636.1 0.0 1 744 1 744
VEI15775.1 0.0 1 744 1 744
QQC21313.1 0.0 1 744 1 744
QLF53918.1 0.0 1 744 1 736
QQQ58632.1 0.0 1 744 1 736

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K1D_A 0.0 18 742 3 722
Crystalstructure of glycogen branching enzyme synonym: 1,4-alpha-D-glucan:1,4-alpha-D-GLUCAN 6-glucosyl-transferase from mycobacterium tuberculosis H37RV [Mycobacterium tuberculosis H37Rv]
5GQW_A 3.22e-256 31 740 33 772
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR1_A 9.16e-256 31 740 33 772
Crystalstructure of branching enzyme Y500A/D501A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142],5GR6_A Crystal structure of branching enzyme Y500A/D501A double mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR5_A 9.16e-256 31 740 33 772
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GR0_A 1.30e-255 31 740 33 772
Crystalstructure of branching enzyme D501A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1B568 0.0 35 741 33 741
1,4-alpha-glucan branching enzyme GlgB OS=Mycobacterium sp. (strain MCS) OX=164756 GN=glgB PE=3 SV=1
Q2J6Q9 0.0 28 742 96 812
1,4-alpha-glucan branching enzyme GlgB OS=Frankia casuarinae (strain DSM 45818 / CECT 9043 / CcI3) OX=106370 GN=glgB PE=3 SV=1
A0PUI6 0.0 18 742 12 731
1,4-alpha-glucan branching enzyme GlgB OS=Mycobacterium ulcerans (strain Agy99) OX=362242 GN=glgB PE=3 SV=1
Q47SE7 0.0 36 739 42 744
1,4-alpha-glucan branching enzyme GlgB OS=Thermobifida fusca (strain YX) OX=269800 GN=glgB PE=3 SV=1
Q0SGR9 0.0 15 739 6 728
1,4-alpha-glucan branching enzyme GlgB OS=Rhodococcus jostii (strain RHA1) OX=101510 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000032 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000112_01098.