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CAZyme Information: MGYG000000122_00091

You are here: Home > Sequence: MGYG000000122_00091

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus epidermidis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus epidermidis
CAZyme ID MGYG000000122_00091
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
472 MGYG000000122_1|CGC2 52042.81 9.6723
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000122 2560588 Isolate Canada North America
Gene Location Start: 120295;  End: 121713  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000122_00091.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033598 elast_bind_EbpS 2.78e-52 15 471 1 466
elastin-binding protein EbpS. The elastin-binding protein EbpS is an adhesin described in Staphylococcus aureus, with orthologs found in many additional staphylococcal species. EbpS is a membrane protein that lacks an N-terminal signal peptide region, has extensive regions low-complexity sequence rich in Asn and Gln, and has a C-terminal LysM domain.
pfam01476 LysM 1.04e-05 430 471 7 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARG66600.1 3.41e-146 1 472 1 472
AVG09544.1 3.41e-146 1 472 1 472
AVA12093.1 1.95e-145 1 472 1 472
VEJ61278.1 1.95e-145 1 472 1 472
AUJ73827.1 1.95e-145 1 472 1 472

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CP59 5.34e-138 13 472 1 460
Probable elastin-binding protein EbpS OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=ebpS PE=4 SV=2
Q5HP65 3.04e-137 13 472 1 460
Probable elastin-binding protein EbpS OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=ebpS PE=4 SV=1
Q53630 3.94e-25 285 471 308 486
Elastin-binding protein EbpS OS=Staphylococcus aureus OX=1280 GN=ebpS PE=1 SV=4
Q6GGT1 3.94e-25 285 471 308 486
Elastin-binding protein EbpS OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=ebpS PE=3 SV=3
Q2YY76 1.73e-24 285 471 305 483
Elastin-binding protein EbpS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=ebpS PE=3 SV=3

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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