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CAZyme Information: MGYG000000124_00125

You are here: Home > Sequence: MGYG000000124_00125

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter youngae
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter youngae
CAZyme ID MGYG000000124_00125
CAZy Family CE8
CAZyme Description Putative acyl-CoA thioester hydrolase YbhC
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 47194.68 5.4696
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000124 5038075 Isolate Canada North America
Gene Location Start: 116861;  End: 118174  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000124_00125.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 100 430 4.7e-54 0.875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 0.0 12 431 2 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PRK10531 PRK10531 0.0 12 430 2 422
putative acyl-CoA thioester hydrolase.
pfam01095 Pectinesterase 2.40e-10 91 354 1 210
Pectinesterase.
PLN02708 PLN02708 5.76e-09 79 316 216 413
Probable pectinesterase/pectinesterase inhibitor
PLN02170 PLN02170 3.79e-08 89 399 224 476
probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEI42721.1 1.62e-316 1 437 1 437
BBV41801.1 9.50e-316 1 437 1 437
VDZ57312.1 9.50e-316 1 437 1 437
BBW40138.1 9.50e-316 1 437 1 437
BBV46716.1 9.50e-316 1 437 1 437

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GRH_A 6.65e-254 39 437 24 422
Crystalstructure of escherichia coli ybhc [Escherichia coli K-12]
4PMH_A 5.29e-64 43 429 1 366
Thestructure of rice weevil pectin methyl esterase [Sitophilus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P46130 4.70e-271 11 437 1 427
Putative acyl-CoA thioester hydrolase YbhC OS=Escherichia coli (strain K12) OX=83333 GN=ybhC PE=1 SV=2
Q47474 5.04e-117 11 423 1 426
Pectinesterase B OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemB PE=1 SV=2
P55743 3.10e-107 45 424 5 396
Pectinesterase B OS=Pectobacterium parmentieri OX=1905730 GN=pemB PE=3 SV=2
E7CIP7 3.18e-63 42 429 16 382
Pectinesterase OS=Sitophilus oryzae OX=7048 GN=CE8-1 PE=1 SV=1
P58601 5.98e-30 49 429 30 394
Pectinesterase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pme PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000083 0.001925 0.998027 0.000014 0.000003 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000124_00125.