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CAZyme Information: MGYG000000124_01096
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter youngae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter youngae | |||||||||||
| CAZyme ID | MGYG000000124_01096 | |||||||||||
| CAZy Family | GH46 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1140102; End: 1141481 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH46 | 3 | 213 | 1.7e-51 | 0.9864864864864865 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam10030 | DUF2272 | 7.98e-34 | 295 | 444 | 5 | 175 | Uncharacterized protein conserved in bacteria (DUF2272). Members of this family of hypothetical bacterial proteins have no known function. However, given its similarity to the CHAP domain it seems likely that this is an enzyme involved in cleaving peptidoglycan. |
| COG4322 | COG4322 | 2.95e-24 | 286 | 454 | 129 | 299 | Uncharacterized protein [Function unknown]. |
| cd00978 | chitosanase_GH46 | 7.77e-17 | 5 | 214 | 1 | 219 | chitosanase belonging to the glycosyl hydrolase 46 family. This family is composed of the chitosanase enzymes which hydrolyzes chitosan, a biopolymer of beta (1,4)-linked-D-glucosamine (GlcN) residues produced by partial or full deacetylation of chitin. Chitosanases play a role in defense against pathogens such as fungi and are found in microorganisms, fungi, viruses, and plants. Microbial chitosanases can be divided into 3 subclasses based on the specificity of the cleavage positions for partial acetylated chitosan. Subclass I chitosanases such as N174 can split GlcN-GlcN and GlcNAc-GlcN linkages, whereas subclass II chitosanases such as Bacillus sp. no. 7-M can cleave only GlcN-GlcN linkages. Subclass III chitosanases such as MH-K1 chitosanase are the most versatile and can split both GlcN-GlcN and GlcN-GlcNAc linkages. |
| pfam01374 | Glyco_hydro_46 | 1.75e-09 | 27 | 213 | 17 | 206 | Glycosyl hydrolase family 46. This family are chitosanase enzymes. |
| pfam05257 | CHAP | 1.93e-04 | 313 | 422 | 1 | 83 | CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVH82013.1 | 0.0 | 1 | 459 | 1 | 459 |
| VEI41757.1 | 0.0 | 1 | 459 | 1 | 459 |
| QCA18294.1 | 0.0 | 1 | 459 | 1 | 459 |
| AYL70867.1 | 9.19e-284 | 1 | 457 | 1 | 468 |
| QRG80104.1 | 2.67e-280 | 1 | 457 | 1 | 474 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6LWU_A | 3.88e-14 | 3 | 213 | 3 | 225 | ChainA, chitosanase [Gynuella sunshinyii YC6258],6X2Q_A Chain A, Chitosanase [Gynuella sunshinyii YC6258] |
| 7C6C_A | 3.87e-11 | 3 | 214 | 3 | 226 | ChainA, Chitosanase [Bacillus subtilis subsp. subtilis str. 168] |
| 7C6D_A | 2.33e-10 | 3 | 214 | 3 | 226 | ChainA, Chitosanase [Bacillus subtilis subsp. subtilis str. 168] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O07921 | 3.18e-10 | 3 | 214 | 38 | 261 | Chitosanase OS=Bacillus subtilis (strain 168) OX=224308 GN=csn PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000055 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |