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CAZyme Information: MGYG000000124_03254

You are here: Home > Sequence: MGYG000000124_03254

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter youngae
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter youngae
CAZyme ID MGYG000000124_03254
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 MGYG000000124_5|CGC2 52843.55 6.7084
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000124 5038075 Isolate Canada North America
Gene Location Start: 85239;  End: 86672  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.21

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 2 474 1e-162 0.9957627118644068

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02095 glgA 0.0 1 476 1 473
glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PRK00654 glgA 0.0 1 476 1 463
glycogen synthase GlgA.
PRK14099 PRK14099 0.0 1 476 4 479
glycogen synthase GlgA.
COG0297 GlgA 0.0 1 476 1 478
Glycogen synthase [Carbohydrate transport and metabolism].
cd03791 GT5_Glycogen_synthase_DULL1-like 0.0 2 475 1 474
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYL58785.1 0.0 1 477 1 477
AKL57604.1 0.0 1 477 1 477
QHD96902.1 0.0 1 477 1 477
QSB79217.1 0.0 1 477 1 477
QBI28021.1 0.0 1 477 1 477

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2QZS_A 0.0 1 477 1 477
CrystalStructure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSb) [Escherichia coli],2R4T_A Crystal Structure of Wild-type E.coli GS in Complex with ADP and Glucose(wtGSc) [Escherichia coli],2R4U_A Crystal Structure of Wild-type E.coli GS in complex with ADP and Glucose(wtGSd) [Escherichia coli],3GUH_A Crystal Structure of Wild-type E.coli GS in complex with ADP and DGM [Escherichia coli K-12]
3COP_A 0.0 1 477 1 477
ChainA, Glycogen synthase [Escherichia coli],3CX4_A Chain A, Glycogen synthase [Escherichia coli]
3D1J_A 0.0 1 477 1 477
ChainA, Glycogen synthase [Escherichia coli]
1RZU_A 5.85e-129 1 476 1 475
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]
1RZV_A 6.81e-125 2 476 2 475
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZV_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B7MDR4 0.0 1 477 1 477
Glycogen synthase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) OX=585035 GN=glgA PE=3 SV=1
B7UKD4 0.0 1 477 1 477
Glycogen synthase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=glgA PE=3 SV=1
B7NMJ4 0.0 1 477 1 477
Glycogen synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=glgA PE=3 SV=1
B7N176 0.0 1 477 1 477
Glycogen synthase OS=Escherichia coli O81 (strain ED1a) OX=585397 GN=glgA PE=3 SV=1
C0Q0K9 0.0 1 477 1 477
Glycogen synthase OS=Salmonella paratyphi C (strain RKS4594) OX=476213 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999752 0.000240 0.000058 0.000001 0.000000 0.000003

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000124_03254.