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CAZyme Information: MGYG000000134_01118

You are here: Home > Sequence: MGYG000000134_01118

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Longibaculum muris
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Longibaculum; Longibaculum muris
CAZyme ID MGYG000000134_01118
CAZy Family CBM4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1204 MGYG000000134_5|CGC3 137695.93 4.7057
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000134 3162983 Isolate Canada North America
Gene Location Start: 159223;  End: 162837  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000134_01118.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM4 28 152 3.2e-22 0.9841269841269841
CBM4 320 444 9.2e-20 0.8809523809523809
GH30 610 894 3.9e-16 0.592326139088729

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02018 CBM_4_9 1.84e-09 320 462 3 133
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
COG4932 COG4932 4.00e-08 958 1086 1065 1197
Uncharacterized surface anchored protein [Function unknown].
COG4932 COG4932 6.37e-08 953 1086 971 1104
Uncharacterized surface anchored protein [Function unknown].
pfam02018 CBM_4_9 6.50e-08 28 139 2 116
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
COG4932 COG4932 1.25e-07 953 1086 1158 1290
Uncharacterized surface anchored protein [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQV06119.1 8.88e-298 2 955 6 961
QMW75430.1 3.55e-297 2 955 6 961
QPS14235.1 3.55e-297 2 955 6 961
QQY26901.1 1.00e-296 2 955 6 961
QMW75427.1 5.77e-71 493 978 37 599

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000502 0.700556 0.298239 0.000234 0.000234 0.000218

TMHMM  Annotations      download full data without filtering help

start end
1177 1199