CAZyme Information: MGYG000000138_01162

Basic Information

• Species: Parabacteroides johnsonii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides johnsonii
• CAZyme ID: MGYG000000138_01162
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
606	MGYG000000138_4|CGC2	68319.54	5.8158

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000138	4917599	Isolate	United Kingdom	Europe

• Gene Location: Start: 52664; End: 54484 Strand: -

Full Sequence      

MRLISLIGLFFLLFSFVVTGRDLSVRQSGKDLLQHPRLLFSKQEEQRIRDLFGTEPLLDS
LYVGLMKEAERLLLVPPQEDPRREIKNTKDILPISREQVYRMVNLALAYRLSGDRRFAEK
AEKELVHVCNFPDWDPIHYLDVAEMTTAVAIGYDWLYDVLAPLTRQLVVHSIKTKALDLV
VEEYNTGNADSWAKRETNWNVVCNTGMVLGALAIEEHYPELAKHIIGEAVRYIPNCLKHF
APDGVCYEGPAYWGYTNMYLSLLLKALNDNFGGDFGLSEMVGVDKSVLYYMHSTSPSGKI
FNFANSGSTAPAAEPIYFYFSRAFNQPEVATFYRDVLSKTVHEGNYFRFYFLSIPWYDTA
SSTADALPKLKVYEGINDIVVFNGNRNIPNSLYLIAKTGDPDMAHQQLDIGTFIVEMNGI
RWTDDLGTDNYNLPGFWDYKPDGQRWTYFRNSNFSHNTLSIDHKLQNSAGTGDIDRLDDR
AAQPFVTMNMSTAYAGQSRFVYRTFRMLDDTRILVTDSVGLQSPSQSVQWSVITSADVEC
KGNTAVLRKDGKSFSLKIASPTNASFTTKAAKRGTEAEKPIEGYTVLSASVSGEPVQVIK
VLLSGE

Enzyme Prediction     

No EC number prediction in MGYG000000138_01162.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	390	562	2.6e-54	0.9832402234636871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07940	Hepar_II_III	1.72e-07	390	551	20	185	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332	DUF4962	3.22e-07	15	176	111	290	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT50039.1	0.0	1	606	1	606
QRP59764.1	1.95e-192	32	589	24	580
QQT79787.1	1.95e-192	32	589	24	580
ASM65217.1	2.83e-192	32	589	35	591
QUU07041.1	1.11e-191	32	589	24	580

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000222	0.999176	0.000156	0.000140	0.000141	0.000136

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000138_01162.