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CAZyme Information: MGYG000000138_01484

You are here: Home > Sequence: MGYG000000138_01484

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Parabacteroides johnsonii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides johnsonii
CAZyme ID MGYG000000138_01484
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
617 MGYG000000138_5|CGC1 71168.38 6.5696
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000138 4917599 Isolate United Kingdom Europe
Gene Location Start: 89081;  End: 90934  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000138_01484.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 33 610 1.7e-95 0.6117021276595744

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.49e-36 21 516 1 490
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 3.39e-33 85 446 62 444
beta-D-glucuronidase; Provisional
PRK10340 ebgA 9.12e-27 59 448 90 473
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 4.97e-18 184 460 205 499
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 2.04e-11 298 453 1 164
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT49303.1 0.0 1 617 1 617
QCY58205.1 0.0 2 615 3 616
QRO15053.1 0.0 2 615 3 616
ABR44827.1 0.0 2 615 3 616
QUT20946.1 0.0 2 615 3 616

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7SF2_A 4.35e-80 24 609 27 578
ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_E Chain E, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838],7SF2_F Chain F, Glycosyl hydrolase family 2, sugar binding domain protein [Bacteroides cellulosilyticus DSM 14838]
6XXW_A 1.51e-35 81 615 65 594
Structureof beta-D-Glucuronidase for Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12]
6JZ1_A 7.70e-34 38 418 19 418
Apostructure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ1_B Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution [[Ruminococcus] gnavus],6JZ5_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ5_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucuronic acid [[Ruminococcus] gnavus],6JZ6_A b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ6_B b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_A b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ7_B b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine [[Ruminococcus] gnavus],6JZ8_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus],6JZ8_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone [[Ruminococcus] gnavus]
5Z18_A 9.16e-34 38 418 43 442
Thecrystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_B The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_C The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_D The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_E The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z18_F The crystal structure of Ruminococcus gnavus beta-glucuronidase [[Ruminococcus] gnavus],5Z19_A The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_B The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_C The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_D The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_E The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],5Z19_F The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine [[Ruminococcus] gnavus],6JZ2_A b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ2_B b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution [[Ruminococcus] gnavus],6JZ3_A b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ3_B b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin [[Ruminococcus] gnavus],6JZ4_A b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus],6JZ4_B b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam [[Ruminococcus] gnavus]
5C70_A 4.89e-33 85 600 68 587
Thestructure of Aspergillus oryzae beta-glucuronidase [Aspergillus oryzae],5C70_B The structure of Aspergillus oryzae beta-glucuronidase [Aspergillus oryzae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P05804 1.70e-28 39 446 15 440
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
T2KPJ7 7.79e-28 91 544 106 541
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
O18835 8.83e-25 26 466 29 503
Beta-glucuronidase OS=Canis lupus familiaris OX=9615 GN=GUSB PE=1 SV=1
P77989 1.10e-24 91 527 59 492
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
T2KM09 5.89e-23 91 452 109 459
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000329 0.998992 0.000180 0.000166 0.000154 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000138_01484.